RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MID2Q9UJV3 735 aa10.78□□□□□ -0.68
HDAC3-204ENST00000469207 IGKV3D-15A0A087WSY6 115 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 GOLGA8QA0A0J9YX86 632 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 RNF103-CHMP3A0A140T963 221 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 GOLGA8OA6NCC3 632 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 GOLGA8NF8WBI6 632 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 PHF1O43189 567 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-204ENST00000469207 ITM2AO43736 263 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 CPSF4O95639 269 aaKnown RBP10.77□□□□□ -0.69
HDAC3-204ENST00000469207 IFNA2P01563 188 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 ITGA5P08648 1049 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 PGCP20142 388 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 CLDN8P56748 225 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-204ENST00000469207 SLC25A3Q00325 362 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 FUT5Q11128 374 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 TMEM108Q6UXF1 575 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 EIF3MQ7L2H7 374 aaKnown RBP10.77□□□□□ -0.69
HDAC3-204ENST00000469207 P2RY8Q86VZ1 359 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 FBXL14Q8N1E6 418 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 ZNF563Q8TA94 476 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 APH1AQ96BI3 265 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 SLC35G5Q96KT7 338 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 MUS81Q96NY9 551 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 ZNF350Q9GZX5 532 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 ASB6Q9NWX5 421 aa10.77□□□□□ -0.69
HDAC3-204ENST00000469207 DUXAA6NLW8 204 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 AP3D1O14617 1153 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 SCN2BO60939 215 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 MRPL33O75394 65 aaKnown RBP10.76□□□□□ -0.69
HDAC3-204ENST00000469207 APOBEC1P41238 236 aaKnown RBP10.76□□□□□ -0.69
HDAC3-204ENST00000469207 IDH2P48735 452 aaKnown RBP10.76□□□□□ -0.69
HDAC3-204ENST00000469207 OR2B6P58173 313 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 PDK3Q15120 406 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 NRF1Q16656 503 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 CLEC2AQ6UVW9 174 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 IL17RELQ6ZVW7 336 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 C16orf62Q7Z3J2 963 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 NATD1Q8N6N6 113 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 OR4A15Q8NGL6 344 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 TMEM234Q8WY98 164 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 TMEM158Q8WZ71 300 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 CNOT9Q92600 299 aaKnown RBP10.76□□□□□ -0.69
HDAC3-204ENST00000469207 ARL8AQ96BM9 186 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 MOAP1Q96BY2 351 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 INPP5KQ9BT40 448 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 CHRNA9Q9UGM1 479 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 ATP23Q9Y6H3 246 aa10.76□□□□□ -0.69
HDAC3-204ENST00000469207 HEATR1Q9H583 2144 aaKnown RBP10.76□□□□□ -0.69
HDAC3-204ENST00000469207 TMEM72A0PK05 275 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 WDR91A4D1P6 747 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 ELOA3DA6NLF2 546 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-204ENST00000469207 PDLIM1O00151 329 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 KLF11O14901 512 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 BPGMP07738 259 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 DHRS4L1P0CG22 281 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 FAM157CP0CG43 387 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 IMPDH2P12268 514 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 ZNF16P17020 682 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-204ENST00000469207 CDH2P19022 906 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-204ENST00000469207 PTAFRP25105 342 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 KCNJ10P78508 379 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 H3F3AP84243 136 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 EMX2Q04743 252 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 LOXL1Q08397 574 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-204ENST00000469207 PDCD2Q16342 344 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-204ENST00000469207 KRTAP24-1Q3LI83 254 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 ELOA3BQ3SY89 546 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 TSPO2Q5TGU0 170 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 EMBQ6PCB8 327 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 BHLHB9Q6PI77 547 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 KLHL17Q6TDP4 642 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 FRRS1Q6ZNA5 592 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 FAM71CQ8NEG0 241 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 ELOA3Q8NG57 546 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 C10orf105Q8TEF2 133 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 FAM168AQ92567 244 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 ZBTB9Q96C00 473 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 ROPN1LQ96C74 230 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 RADILQ96JH8 1075 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 PKNOX2Q96KN3 472 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 BEX2Q9BXY8 128 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 C20orf27Q9GZN8 174 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 AKTIPQ9H8T0 292 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 PPCSQ9HAB8 311 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 SLC7A10Q9NS82 523 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 EXD2Q9NVH0 621 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 MKS1Q9NXB0 559 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 TAS2R16Q9NYV7 291 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 EMC3Q9P0I2 261 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 MGAT4BQ9UQ53 548 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 WDR45Q9Y484 360 aa10.75□□□□□ -0.69
HDAC3-204ENST00000469207 PLCE1Q9P212 2302 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 TMED7-TICAM2A0A0A6YYA0 188 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 ZC3H12DA2A288 527 aaKnown RBP10.74□□□□□ -0.69
HDAC3-204ENST00000469207 SLC35F4A4IF30 521 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 KIAA0513O60268 411 aa10.74□□□□□ -0.69
HDAC3-204ENST00000469207 PMS2P2O95744 297 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms