RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CDK4P11802 303 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 CCL4P13236 92 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 CD59P13987 128 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 CD36P16671 472 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF28P17035 718 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 HK1P19367 917 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PTNP21246 168 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ACVR2AP27037 513 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 HTR1FP30939 366 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 SERPINB10P48595 397 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PRPS1P60891 318 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ROR2Q01974 943 aaKnown RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 NFATC3Q12968 1075 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 MED22Q15528 200 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 LCN1P1Q5VSP4 162 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF517Q6ZMY9 492 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 SLC16A12Q6ZSM3 486 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 DND1Q8IYX4 353 aaKnown RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PSD4Q8NDX1 1056 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PROKR2Q8NFJ6 384 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 OR2Y1Q8NGV0 311 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 OR5W2Q8NH69 310 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 B4GALNT2Q8NHY0 566 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM234Q8WY98 164 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 FGF11Q92914 225 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ARSGQ96EG1 525 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 RNFT2Q96EX2 444 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 DEPDC7Q96QD5 511 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 TAAR9Q96RI9 348 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 WDR77Q9BQA1 342 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 DEFB126Q9BYW3 111 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF700Q9H0M5 742 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 SDHAF3Q9NRP4 125 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PTRH2Q9Y3E5 179 aaKnown RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PCDHGA1Q9Y5H4 931 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 EP300Q09472 2414 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 GVINP1Q7Z2Y8 2422 aa8.54□□□□□ -1.04
SMC1A-205ENST00000469129 PTPRZ1P23471 2315 aaPredicted RBP8.54□□□□□ -1.04
SMC1A-205ENST00000469129 TRAV27A0A087WT01 109 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CCDC187A0A096LP49 1063 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 A0A1W2PPW3 197 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 A0A1W2PQ72 361 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM129A0AVI4 362 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ANKUB1A6NFN9 424 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CCRL2O00421 344 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 PLD2O14939 933 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 OIP5O43482 229 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 IDH3BO43837 385 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 LRP3O75074 770 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 PTP4A3O75365 173 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ATE1O95260 518 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 NADKO95544 446 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CH25HO95992 272 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 RAB40ALP0C0E4 278 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 JMJD7P0C870 316 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CXCR1P25024 350 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ITPKBP27987 946 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 MSX1P28360 303 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 PCSK6P29122 969 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 NOS3P29474 1203 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 TGFBR2P37173 567 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CAPZA2P47755 286 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 POLR2HP52434 150 aaKnown RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 RPS4XP62701 263 aaKnown RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 C17orf67Q0P5P2 114 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 POU4F2Q12837 409 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 PCOLCEQ15113 449 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ISXQ2M1V0 245 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ARMCX4Q5H9R4 360 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM164Q5U3C3 297 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 AADACL4Q5VUY2 407 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CBLN3Q6UW01 205 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 APOOLQ6UXV4 268 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 DPY19L2P2Q6ZN68 376 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 RAB11FIP2Q7L804 512 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 SLC46A3Q7Z3Q1 461 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 GRINAQ7Z429 371 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 MARCH3Q86UD3 253 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 GALNT6Q8NCL4 622 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 KBTBD8Q8NFY9 601 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 OR52I1Q8NGK6 324 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 LIPHQ8WWY8 451 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ST8SIA1Q92185 356 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 HGDQ93099 445 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 LGALS12Q96DT0 336 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 RNF31Q96EP0 1072 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 SH3YL1Q96HL8 342 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 GPX7Q96SL4 187 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 DCUN1D5Q9BTE7 237 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 JAM3Q9BX67 310 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 NAA50Q9GZZ1 169 aaKnown RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 ZBTB20Q9HC78 741 aaPredicted RBP8.53□□□□□ -1.04
SMC1A-205ENST00000469129 MCCC2Q9HCC0 563 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 INPP5EQ9NRR6 644 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 TAS2R10Q9NYW0 307 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 GPR52Q9Y2T5 361 aa8.53□□□□□ -1.04
SMC1A-205ENST00000469129 CFAP54Q96N23 3096 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms