RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	FGF11	Q92914	225 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF524	Q96C55	264 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF582	Q96NG8	517 aa	Predicted RBP	11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	IFT27	Q9BW83	186 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	YIPF3	Q9GZM5	350 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	IRF2BPL	Q9H1B7	796 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	UBQLN3	Q9H347	655 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	MCCC2	Q9HCC0	563 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	HHATL	Q9HCP6	504 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	GALNT9	Q9HCQ5	603 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	ACOT13	Q9NPJ3	140 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	MED17	Q9NVC6	651 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	PPP4R1L	Q9P1A2	415 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	RSL24D1	Q9UHA3	163 aa	Known RBP	11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	FARSA	Q9Y285	508 aa	Known RBP	11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	GPR52	Q9Y2T5	361 aa		11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	RPL36	Q9Y3U8	105 aa	Known RBP	11.21	□□□□□ -0.61
HDLBP-231	ENST00000467435	VPS13A	Q96RL7	3174 aa		11.21	□□□□□ -0.62
HDLBP-231	ENST00000467435	HTR3E	A5X5Y0	456 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	ANKUB1	A6NFN9	424 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	SNTN	A6NMZ2	147 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	KDM4E	B2RXH2	506 aa	Predicted RBP	11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	BHLHE40	O14503	412 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	RAD1	O60671	282 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	PTP4A3	O75365	173 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	INMT	O95050	263 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	PPP1R3D	O95685	299 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	HP	P00738	406 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	IGF2	P01344	180 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	STS	P08842	583 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	DLST	P36957	453 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	SOX3	P41225	446 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	SLC15A1	P46059	708 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	GAS1	P54826	345 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	C17orf67	Q0P5P2	114 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	ST3GAL4	Q11206	333 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	TUBA3C	Q13748	450 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	SSPN	Q14714	243 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	BICRAL	Q6AI39	1079 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	THSD4	Q6ZMP0	1018 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	LNX2	Q8N448	690 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	ANKK1	Q8NFD2	765 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	GPR119	Q8TDV5	335 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	ASB15	Q8WXK1	588 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	FCGR1B	Q92637	280 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	ADAM19	Q9H013	955 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	METTL7A	Q9H8H3	244 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	TAS2R10	Q9NYW0	307 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	OSGIN1	Q9UJX0	560 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	FBXL4	Q9UKA2	621 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	BAIAP2	Q9UQB8	552 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF337	Q9Y3M9	751 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	WIF1	Q9Y5W5	379 aa		11.2	□□□□□ -0.62
HDLBP-231	ENST00000467435	PCNX3	Q9H6A9	2034 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	MYO15A	Q9UKN7	3530 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	TTC28	Q96AY4	2481 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	WDFY4	Q6ZS81	3184 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	C2orf72	A6NCS6	295 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	C21orf140	B9A014	251 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	LRRN3	E7EW58	273 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	TP53I11	O14683	189 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	PRODH	O43272	600 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	MAN1A2	O60476	641 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	NOL3	O60936	208 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	NDUFB2	O95178	105 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	SLC2A10	O95528	541 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	CCNA2	P20248	432 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	CXCR1	P25024	350 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	DCK	P27707	260 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	PSMB9	P28065	219 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	C21orf33	P30042	268 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	PTGDS	P41222	190 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	POLR2H	P52434	150 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	GP2	P55259	537 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	EGR4	Q05215	589 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	FHL1	Q13642	323 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	IL10RA	Q13651	578 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF74	Q16587	644 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	TMEM44	Q2T9K0	475 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	ZNF791	Q3KP31	576 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	GPR107	Q5VW38	600 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	FCRLB	Q6BAA4	426 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	ARHGAP11A	Q6P4F7	1023 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	POMZP3	Q6PJE2	187 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	OPN5	Q6U736	354 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	GRINA	Q7Z429	371 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	CACTIN-AS1	Q8N1I8	211 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	C10orf53	Q8N6V4	93 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	LRRC17	Q8N6Y2	441 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	TMEM234	Q8WY98	164 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	ISOC1	Q96CN7	298 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	NMD3	Q96D46	503 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	TNFRSF13C	Q96RJ3	184 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	GPR87	Q9BY21	358 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	ENKD1	Q9H0I2	346 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	SDHAF3	Q9NRP4	125 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	YARS2	Q9Y2Z4	477 aa	Known RBP	11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	PTPRB	P23467	1997 aa		11.19	□□□□□ -0.62
HDLBP-231	ENST00000467435	EML6	Q6ZMW3	1958 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms