RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 TRIM3O75382 744 aaPredicted RBP11.01□□□□□ -0.65
VPS16-206ENST00000466415 CBR3O75828 277 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 SOX14O95416 240 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 AHSA1O95433 338 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 DPP4P27487 766 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 EIF1P41567 113 aaKnown RBP11.01□□□□□ -0.65
VPS16-206ENST00000466415 GSSP48637 474 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 UCNP55089 124 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 CTBP2P56545 445 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■■□ 23.2
VPS16-206ENST00000466415 PLGLB1Q02325 96 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.01□□□□□ -0.65
VPS16-206ENST00000466415 SLC36A3Q495N2 470 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 CMPK2Q5EBM0 449 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 RAET1LQ5VY80 246 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 SLC25A25Q6KCM7 469 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 C5orf46Q6UWT4 87 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 CD300LDQ6UXZ3 194 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 LINC00114Q6XXX2 140 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 RASSF6Q6ZTQ3 369 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 ZNF227Q86WZ6 799 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 TMEM178AQ8NBL3 297 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 SETD9Q8NE22 299 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 FANK1Q8TC84 345 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 ANKRD60Q9BZ19 345 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 PROK2Q9HC23 129 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 ZFP64Q9NPA5 681 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 C20orf141Q9NUB4 165 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 TBC1D23Q9NUY8 699 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 TUBA8Q9NY65 449 aaPredicted RBP11.01□□□□□ -0.65
VPS16-206ENST00000466415 CHRNA9Q9UGM1 479 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 HRH3Q9Y5N1 445 aa11.01□□□□□ -0.65
VPS16-206ENST00000466415 CPAMD8Q8IZJ3 1885 aa11□□□□□ -0.65
VPS16-206ENST00000466415 TRAV36DV7A0A075B6V5 113 aa11□□□□□ -0.65
VPS16-206ENST00000466415 TMEM72A0PK05 275 aa11□□□□□ -0.65
VPS16-206ENST00000466415 A8MVM7 634 aa11□□□□□ -0.65
VPS16-206ENST00000466415 KLRC4-KLRK1H3BQV0 150 aa11□□□□□ -0.65
VPS16-206ENST00000466415 DENRO43583 198 aaKnown RBP11□□□□□ -0.65
VPS16-206ENST00000466415 NME2P1O60361 137 aa11□□□□□ -0.65
VPS16-206ENST00000466415 OR7A10O76100 309 aa11□□□□□ -0.65
VPS16-206ENST00000466415 SP1P08047 785 aa11□□□□□ -0.65
VPS16-206ENST00000466415 MAKP20794 623 aa11□□□□□ -0.65
VPS16-206ENST00000466415 NME2P22392 152 aa11□□□□□ -0.65
VPS16-206ENST00000466415 GDF1P27539 372 aa11□□□□□ -0.65
VPS16-206ENST00000466415 SRD5A2P31213 254 aa11□□□□□ -0.65
VPS16-206ENST00000466415 RPS6KA3P51812 740 aa11□□□□□ -0.65
VPS16-206ENST00000466415 CRISP1P54107 249 aa11□□□□□ -0.65
VPS16-206ENST00000466415 TMPRSS3P57727 454 aa11□□□□□ -0.65
VPS16-206ENST00000466415 ADARB1P78563 741 aaKnown RBP11□□□□□ -0.65
VPS16-206ENST00000466415 IL18R1Q13478 541 aa11□□□□□ -0.65
VPS16-206ENST00000466415 KEAP1Q14145 624 aa11□□□□□ -0.65
VPS16-206ENST00000466415 SLC25A53Q5H9E4 307 aa11□□□□□ -0.65
VPS16-206ENST00000466415 ZNF766Q5HY98 468 aa11□□□□□ -0.65
VPS16-206ENST00000466415 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
VPS16-206ENST00000466415 C3orf33Q6P1S2 294 aa11□□□□□ -0.65
VPS16-206ENST00000466415 TMPRSS11FQ6ZWK6 438 aa11□□□□□ -0.65
VPS16-206ENST00000466415 GALNTL5Q7Z4T8 443 aa11□□□□□ -0.65
VPS16-206ENST00000466415 CHERPQ8IWX8 916 aaKnown RBP11□□□□□ -0.65
VPS16-206ENST00000466415 C8orf59Q8N0T1 100 aaPredicted RBP11□□□□□ -0.65
VPS16-206ENST00000466415 FAM98AQ8NCA5 519 aaKnown RBP11□□□□□ -0.65
VPS16-206ENST00000466415 MDS2Q8NDY4 140 aa11□□□□□ -0.65
VPS16-206ENST00000466415 OR2M7Q8NG81 312 aa11□□□□□ -0.65
VPS16-206ENST00000466415 OR52L1Q8NGH7 329 aa11□□□□□ -0.65
VPS16-206ENST00000466415 STK35Q8TDR2 534 aa11□□□□□ -0.65
VPS16-206ENST00000466415 HAS2Q92819 552 aa11□□□□□ -0.65
VPS16-206ENST00000466415 GATA6Q92908 595 aa11□□□□□ -0.65
VPS16-206ENST00000466415 DDIT4LQ96D03 193 aa11□□□□□ -0.65
VPS16-206ENST00000466415 ZNF570Q96NI8 536 aa11□□□□□ -0.65
VPS16-206ENST00000466415 GNRHR2Q96P88 292 aa11□□□□□ -0.65
VPS16-206ENST00000466415 APOL4Q9BPW4 351 aa11□□□□□ -0.65
VPS16-206ENST00000466415 TEX12Q9BXU0 123 aa11□□□□□ -0.65
VPS16-206ENST00000466415 HES7Q9BYE0 225 aa11□□□□□ -0.65
VPS16-206ENST00000466415 NDEL1Q9GZM8 345 aa11□□□□□ -0.65
VPS16-206ENST00000466415 MEPEQ9NQ76 525 aaPredicted RBP11□□□□□ -0.65
VPS16-206ENST00000466415 DEPPQ9NTK1 212 aa11□□□□□ -0.65
VPS16-206ENST00000466415 RPH3AQ9Y2J0 694 aaPredicted RBP11□□□□□ -0.65
VPS16-206ENST00000466415 CDH10Q9Y6N8 788 aa11□□□□□ -0.65
VPS16-206ENST00000466415 NINQ8N4C6 2090 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 IGKV1D-42A0A075B6H8 117 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 LRRC3CA6NJW4 275 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 B4DXG7 233 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 SHISA8B8ZZ34 492 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 ETV2O00321 342 aaPredicted RBP10.99□□□□□ -0.65
VPS16-206ENST00000466415 SLC16A6O15403 523 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 HCN1O60741 890 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 TRAPPC6AO75865 159 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 CEACAM4O75871 244 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 RCBTB2O95199 551 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 CLIC3O95833 236 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 CH25HO95992 272 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 IGF2P01344 180 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 TFPIP10646 304 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 ZNF17P17021 662 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 BMP7P18075 431 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 MYF6P23409 242 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 CHMP24386 653 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 ADH6P28332 368 aa10.99□□□□□ -0.65
VPS16-206ENST00000466415 GTF2E2P29084 291 aaKnown RBP10.99□□□□□ -0.65
VPS16-206ENST00000466415 SLC9A3P48764 834 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms