RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LRTOMTQ8WZ04 291 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 MPP4Q96JB8 637 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 PKP2Q99959 881 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 PIGQQ9BRB3 760 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 TMEM43Q9BTV4 400 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 FNDC11Q9BVV2 318 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 DEFB127Q9H1M4 99 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 TSPAN10Q9H1Z9 355 aaPredicted RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 RPS6KB2Q9UBS0 482 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 DNAJB9Q9UBS3 223 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 CHRNA9Q9UGM1 479 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 FAM32AQ9Y421 112 aaKnown RBP10.06□□□□□ -0.8
VCP-204ENST00000466100 FLNCQ14315 2725 aa10.06□□□□□ -0.8
VCP-204ENST00000466100 ARHGAP21Q5T5U3 1957 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 TRBV4-1A0A0J9YWV2 114 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 TMEM72A0PK05 275 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 ZC3H12DA2A288 527 aaKnown RBP10.05□□□□□ -0.8
VCP-204ENST00000466100 LINC01387J3KSC0 135 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 ZNF208O43345 1280 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SUSD5O60279 629 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 MGRN1O60291 552 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 HCN1O60741 890 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 FZD7O75084 574 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
VCP-204ENST00000466100 FASP25445 335 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SHC1P29353 583 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 RBM34P42696 430 aaKnown RBP10.05□□□□□ -0.8
VCP-204ENST00000466100 LHX2P50458 406 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 IST1P53990 364 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 UGT2B15P54855 530 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 LSM11P83369 360 aaKnown RBP eCLIP10.05□□□□□ -0.8
VCP-204ENST00000466100 SELENBP1Q13228 472 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 TRAM2Q15035 370 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 TOMM20Q15388 145 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SEC23BQ15437 767 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 DCST1Q5T197 706 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 C3orf33Q6P1S2 294 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 FAM180AQ6UWF9 173 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 GGNQ86UU5 652 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 CISD2Q8N5K1 135 aaKnown RBP10.05□□□□□ -0.8
VCP-204ENST00000466100 LSM14AQ8ND56 463 aaKnown RBP10.05□□□□□ -0.8
VCP-204ENST00000466100 NEIL3Q8TAT5 605 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 TMEM255BQ8WV15 326 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 STMN2Q93045 179 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SNRNP40Q96DI7 357 aaKnown RBP10.05□□□□□ -0.8
VCP-204ENST00000466100 GPR137Q96N19 417 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SFXN2Q96NB2 322 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 EPYCQ99645 322 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SLX1AQ9BQ83 275 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SPRR3Q9UBC9 169 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 SLC6A5Q9Y345 797 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 ZNF337Q9Y3M9 751 aa10.05□□□□□ -0.8
VCP-204ENST00000466100 ZNF462Q96JM2 2506 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 A0A087WUU8 490 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 TRGV5A0A0B4J1U4 118 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 SH3PXD2BA1X283 911 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 ELOA3DA6NLF2 546 aaPredicted RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 NPIPA5E9PKD4 350 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 AQP7O14520 342 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 GADD45GO95257 159 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 LDLRP01130 860 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 BMP7P18075 431 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 CXCR1P25024 350 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 MAP2K6P52564 334 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 CLDN15P56746 228 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 CLDN18P56856 261 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 SMIM11AP58511 58 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 RAC1P63000 192 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 CRYZQ08257 329 aaKnown RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 C19orf57Q0VDD7 668 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 PPP1R8Q12972 351 aaKnown RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 GK3PQ14409 553 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 RCN1Q15293 331 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 EXOC3L2Q2M3D2 409 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 CTU2Q2VPK5 515 aaKnown RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 ELOA3BQ3SY89 546 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 SYT14P1Q58G82 188 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 VASNQ6EMK4 673 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 ZNF770Q6IQ21 691 aaPredicted RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 PODNL1Q6PEZ8 512 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 POMZP3Q6PJE2 187 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 TBPL2Q6SJ96 375 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 FGD2Q7Z6J4 655 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 AMIGO2Q86SJ2 522 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 PQLC1Q8N2U9 271 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 ELOA3Q8NG57 546 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 OR52J3Q8NH60 311 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 STK35Q8TDR2 534 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 SLC25A43Q8WUT9 341 aaPredicted RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 FAR1Q8WVX9 515 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 TMEM239Q8WW34 195 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 ADGRG7Q96K78 797 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 BBC3Q96PG8 261 aaPredicted RBP10.04□□□□□ -0.8
VCP-204ENST00000466100 PTDSS2Q9BVG9 487 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 SLC19A3Q9BZV2 496 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 OR11A1Q9GZK7 315 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 COQ10BQ9H8M1 238 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 REEP1Q9H902 201 aa10.04□□□□□ -0.8
VCP-204ENST00000466100 MEPEQ9NQ76 525 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms