RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 OR2A12Q8NGT7 310 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 OR2T3Q8NH03 318 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 SETD7Q8WTS6 366 aaKnown RBP2.28□□□□□ -2.04
GARNL3-213ENST00000464616 RPL3LQ92901 407 aaKnown RBP2.28□□□□□ -2.04
GARNL3-213ENST00000464616 BADQ92934 168 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 NEIL2Q969S2 332 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 PHYHIPLQ96FC7 376 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 TPD52L3Q96J77 140 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 CLCC1Q96S66 551 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 HIST1H4GQ99525 98 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 COPS8Q99627 209 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 RIOK1Q9BRS2 568 aaKnown RBP2.28□□□□□ -2.04
GARNL3-213ENST00000464616 NICN1Q9BSH3 213 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 TMEM43Q9BTV4 400 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 CAPS2Q9BXY5 557 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 SRXN1Q9BYN0 137 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 DEFB126Q9BYW3 111 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 NMUR2Q9GZQ4 415 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 RHBGQ9H310 441 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 LRRN3Q9H3W5 708 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 ZDHHC11Q9H8X9 412 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 GORASP2Q9H8Y8 452 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 MEAF6Q9HAF1 191 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 SGK2Q9HBY8 427 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 B3GNT2Q9NY97 397 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 RIMS3Q9UJD0 308 aa2.28□□□□□ -2.04
GARNL3-213ENST00000464616 CFAP65Q6ZU64 1925 aaKnown RBP2.28□□□□□ -2.04
GARNL3-213ENST00000464616 GON4LQ3T8J9 2241 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 RPAP1Q9BWH6 1393 aaPredicted RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 SH3TC1Q8TE82 1336 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 CLSPNQ9HAW4 1339 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FAM168BA1KXE4 195 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 METTL21EPA6NDL7 271 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 PRRG1O14668 218 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 RIPK2O43353 540 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 HCRTR1O43613 425 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 UGT1A9O60656 530 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 SNAPINO95295 136 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 TSPAN12O95859 305 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 CAPN1P07384 714 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 IGLL1P15814 213 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 UGT1A5P35504 534 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 LEPP41159 167 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 CCT3P49368 545 aaKnown RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 ARFIP1P53367 373 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 ST3GAL3Q11203 375 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 ORC2Q13416 577 aaPredicted RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 ARFRP1Q13795 201 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 ELAVL3Q14576 367 aaKnown RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 AANATQ16613 207 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 KYAT1Q16773 422 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 SLC25A52Q3SY17 297 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 TIGITQ495A1 244 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 SFT2D3Q587I9 215 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FAM120AOSQ5T036 256 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 C11orf71Q6IPW1 123 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FAM199XQ6PEV8 388 aaPredicted RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 KCNIP4Q6PIL6 250 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 HSDL2Q6YN16 418 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 NANOGNBQ7Z5D8 188 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 NBPF5PQ86XG9 351 aaPredicted RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 CCDC65Q8IXS2 484 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 C11orf42Q8N5U0 333 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 KIR3DL3Q8N743 410 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FAM133AQ8N9E0 248 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 BBS1Q8NFJ9 593 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 OR2AP1Q8NGE2 309 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 OR51G2Q8NGK0 314 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 OR5L2Q8NGL0 311 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 PIGCQ92535 297 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 STMN2Q93045 179 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 CXorf40BQ96DE9 158 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 CELF6Q96J87 481 aaKnown RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 MS4A14Q96JA4 679 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 IFT74Q96LB3 600 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 IL4I1Q96RQ9 567 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 RANBP9Q96S59 729 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 EDEM2Q9BV94 578 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 SPATA16Q9BXB7 569 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 IKZF5Q9H5V7 419 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 RANBP3Q9H6Z4 567 aaPredicted RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 PTGES2Q9H7Z7 377 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 ZNF702PQ9H963 129 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FN3KRPQ9HA64 309 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FANCFQ9NPI8 374 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 PRPF19Q9UMS4 504 aaKnown RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 RPL36Q9Y3U8 105 aaKnown RBP2.27□□□□□ -2.05
GARNL3-213ENST00000464616 USP16Q9Y5T5 823 aa2.27□□□□□ -2.05
GARNL3-213ENST00000464616 FANCIQ9NVI1 1328 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 IDSB3KWA1 339 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 EFNA2O43921 213 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 WBP4O75554 376 aaKnown RBP2.26□□□□□ -2.05
GARNL3-213ENST00000464616 CA1P00915 261 aaPredicted RBP2.26□□□□□ -2.05
GARNL3-213ENST00000464616 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 PAX7P23759 505 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 MMP11P24347 488 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 FASP25445 335 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 CALCRP30988 508 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 BTDP43251 543 aa2.26□□□□□ -2.05
GARNL3-213ENST00000464616 STARP49675 285 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms