RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 TUBGCP3Q96CW5 907 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 ARL5BQ96KC2 179 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 MUS81Q96NY9 551 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 CTPS2Q9NRF8 586 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 ASB6Q9NWX5 421 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 POU2F3Q9UKI9 436 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 SVEP1Q4LDE5 3571 aa19.89■□□□□ 0.77
USP4-208ENST00000464168 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.88■□□□□ 0.775e-7■■■■■ 49.5
USP4-208ENST00000464168 PMS2P2O95744 297 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 DHRS4L1P0CG22 281 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 FABP6P51161 128 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 CASP9P55211 416 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 FOXG1P55316 489 aaPredicted RBP19.88■□□□□ 0.77
USP4-208ENST00000464168 CLDN8P56748 225 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 RAB35Q15286 201 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 AP1ARQ63HQ0 302 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 OR4F3Q6IEY1 312 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 C16orf62Q7Z3J2 963 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 CCDC103Q8IW40 242 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 ZNF525Q8N782 197 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 MIPOL1Q8TD10 442 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 DNAJA3Q96EY1 480 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 SLC35G5Q96KT7 338 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 OR51I1Q9H343 314 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 TAS2R16Q9NYV7 291 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 MALT1Q9UDY8 824 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 CHRNA9Q9UGM1 479 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 CDC42EP3Q9UKI2 254 aa19.88■□□□□ 0.77
USP4-208ENST00000464168 RNF103-CHMP3A0A140T963 221 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 GPR171O14626 319 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 PHF1O43189 567 aaPredicted RBP19.87■□□□□ 0.77
USP4-208ENST00000464168 KIAA0513O60268 411 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 SPAG7O75391 227 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 SERPINB5P36952 375 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 SLC16A1P53985 500 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 VLDLRP98155 873 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 GABRA6Q16445 453 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 ADGRG3Q86Y34 549 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 PIGXQ8TBF5 258 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 ZG16BQ96DA0 208 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 ZHX1-C8orf76Q96EF9 292 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 C1QTNF6Q9BXI9 259 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 OR11A1Q9GZK7 315 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 EXD2Q9NVH0 621 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 HDGFL3Q9Y3E1 203 aa19.87■□□□□ 0.77
USP4-208ENST00000464168 SPIN1Q9Y657 262 aaPredicted RBP19.87■□□□□ 0.77
USP4-208ENST00000464168 H7C417 338 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 ANKRD28O15084 1053 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 MRPL33O75394 65 aaKnown RBP19.86■□□□□ 0.77
USP4-208ENST00000464168 GUSBP08236 651 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 ITGA5P08648 1049 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 RYKP34925 604 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 EMX2Q04743 252 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 OR7E24Q6IFN5 339 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 TYW3Q6IPR3 259 aaKnown RBP19.86■□□□□ 0.77
USP4-208ENST00000464168 WDR31Q8NA23 367 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 ZNF563Q8TA94 476 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 TCP10LQ8TDR4 215 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 XAGE5Q8WWM1 108 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 OIT3Q8WWZ8 545 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 INPP5KQ9BT40 448 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 SAP130Q9H0E3 1048 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 ASIC5Q9NY37 505 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 SLC35A3Q9Y2D2 325 aa19.86■□□□□ 0.77
USP4-208ENST00000464168 M0R1B8 84 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 PDLIM1O00151 329 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 RNASET2O00584 256 aaKnown RBP19.85■□□□□ 0.77
USP4-208ENST00000464168 DNPH1O43598 174 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 OR12D1P0DN82 309 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 SLC25A16P16260 332 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 FKBP2P26885 142 aaKnown RBP19.85■□□□□ 0.77
USP4-208ENST00000464168 CLK1P49759 484 aaKnown RBP19.85■□□□□ 0.77
USP4-208ENST00000464168 H3F3AP84243 136 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 PLAURQ03405 335 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 ZNF544Q6NX49 715 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 EMBQ6PCB8 327 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 GRINAQ7Z429 371 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 DEPDC4Q8N2C3 294 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 OR52E4Q8NGH9 312 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 OR4A15Q8NGL6 344 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 RAB8BQ92930 207 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 KCNK17Q96T54 332 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 MANSC1Q9H8J5 431 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 TMEM160Q9NX00 188 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 NOP53Q9NZM5 478 aaKnown RBP19.85■□□□□ 0.77
USP4-208ENST00000464168 WDR45Q9Y484 360 aa19.85■□□□□ 0.77
USP4-208ENST00000464168 SCN2BO60939 215 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 AGR2O95994 175 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 OR2B6P58173 313 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 FUT5Q11128 374 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 MAD2L1Q13257 205 aaPredicted RBP19.84■□□□□ 0.77
USP4-208ENST00000464168 ATAD3BQ5T9A4 648 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 FRRS1Q6ZNA5 592 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 HMGN2P46Q86SG4 172 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 OR8J2Q8NGG1 315 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 C10orf105Q8TEF2 133 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 FAM168AQ92567 244 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 ROPN1LQ96C74 230 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 AMBRA1Q9C0C7 1298 aa19.84■□□□□ 0.77
USP4-208ENST00000464168 POLE3Q9NRF9 147 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms