RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 GALNT5Q7Z7M9 940 aa18.2■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF563Q8TA94 476 aa18.2■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF300Q96RE9 604 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-205ENST00000463615 MANSC1Q9H8J5 431 aa18.2■□□□□ 0.5
PDLIM4-205ENST00000463615 ZIM2Q9NZV7 527 aa18.2■□□□□ 0.5
PDLIM4-205ENST00000463615 GOLGA8QA0A0J9YX86 632 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 GOLGA8OA6NCC3 632 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 CLDN24A6NM45 220 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF716A6NP11 495 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 GOLGA8NF8WBI6 632 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF208O43345 1280 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 PGM3O95394 542 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 KRT75O95678 551 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 PTH2RP49190 550 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 MVDP53602 400 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 H3F3AP84243 136 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 MAPK11Q15759 364 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 GSTA3Q16772 222 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF621Q6ZSS3 439 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 BHLHA15Q7RTS1 189 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 YTHDF3Q7Z739 585 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 PIWIL2Q8TC59 973 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 TMEM171Q8WVE6 324 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 CNOT9Q92600 299 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 ARL5BQ96KC2 179 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 ESRP2Q9H6T0 727 aaKnown RBP18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 TMBIM4Q9HC24 238 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 SDR39U1Q9NRG7 319 aaPredicted RBP18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 NKIRAS1Q9NYS0 192 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 EMC3Q9P0I2 261 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 RNF115Q9Y4L5 304 aa18.19■□□□□ 0.5
PDLIM4-205ENST00000463615 C9JVG2 144 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 SLC22A3O75751 556 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 DBIP07108 87 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 EDNRAP25101 427 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 RYKP34925 604 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 MAGOHP61326 146 aaKnown RBP18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 GNA13Q14344 377 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 TSC22D1Q15714 1073 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 BEND6Q5SZJ8 279 aaPredicted RBP18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 P2RY8Q86VZ1 359 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 LILRB1Q8NHL6 650 aaPredicted RBP18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 ZHX1-C8orf76Q96EF9 292 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 BDH2Q9BUT1 245 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 CXorf56Q9H5V9 222 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 PRSS50Q9UI38 385 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 DSPPQ9NZW4 1301 aa18.18■□□□□ 0.5
PDLIM4-205ENST00000463615 RFXANKO14593 260 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 GPR171O14626 319 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 ERLIN1O75477 346 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 GSNP06396 782 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 ADSLP30566 484 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 SLC1A3P43003 542 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 IDH2P48735 452 aaKnown RBP18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 SLC9B1Q4ZJI4 515 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 COX20Q5RI15 118 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 TIMM23BQ5SRD1 257 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 MAVSQ7Z434 540 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 PIGXQ8TBF5 258 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 MGARPQ8TDB4 240 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 WDR60Q8WVS4 1066 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 AKAP1Q92667 903 aaKnown RBP eCLIP18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 ZBTB9Q96C00 473 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 PERPQ96FX8 193 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 Q96MF0 132 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 SMR3AQ99954 134 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 SLC6A13Q9NSD5 602 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 TMEM181Q9P2C4 612 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 OSGIN1Q9UJX0 560 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 USF3Q68DE3 2245 aa18.17■□□□□ 0.5
PDLIM4-205ENST00000463615 HEXAP06865 529 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 CD3EP07766 207 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 NR2F1P10589 423 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 TFPIP10646 304 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 KITP10721 976 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 IGHV1-2P23083 117 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 MRPL19P49406 292 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 POLR2HP52434 150 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 EPS8Q12929 822 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 FBXW9Q5XUX1 488 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 HMGN2P46Q86SG4 172 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF440Q8IYI8 595 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 ZNF100Q8IYN0 542 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 OR11A1Q9GZK7 315 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 ADAM19Q9H013 955 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 THUMPD1Q9NXG2 353 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 CALML5Q9NZT1 146 aa18.16■□□□□ 0.5
PDLIM4-205ENST00000463615 CADP27708 2225 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 TMED7-TICAM2A0A0A6YYA0 188 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 CFAP73A6NFT4 308 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 OVOL3O00110 214 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 AP3D1O14617 1153 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 EIF1BO60739 113 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 DANCRP0C864 163 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 UQCRBP14927 111 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 IL7RP16871 459 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 LTBQ06643 244 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 ZSWIM7Q19AV6 140 aa18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 MRPL2Q5T653 305 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-205ENST00000463615 NXNQ6DKJ4 435 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms