RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 ZNF716A6NP11 495 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 PHF1O43189 567 aaPredicted RBP13.47□□□□□ -0.25
CMSS1-202ENST00000463526 MRPL33O75394 65 aaKnown RBP13.47□□□□□ -0.25
CMSS1-202ENST00000463526 CPSF4O95639 269 aaKnown RBP13.47□□□□□ -0.25
CMSS1-202ENST00000463526 AK1P00568 194 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 OR12D1P0DN82 309 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 PTAFRP25105 342 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 NTF4P34130 210 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 OR2B6P58173 313 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 ARHGAP11BQ3KRB8 267 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 ABLIM2Q6H8Q1 611 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 C11orf71Q6IPW1 123 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 SSX8Q7RTT4 187 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 DEPDC4Q8N2C3 294 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 OR4A15Q8NGL6 344 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 SLC25A43Q8WUT9 341 aaPredicted RBP13.47□□□□□ -0.25
CMSS1-202ENST00000463526 RAB8BQ92930 207 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 PPP1R36Q96LQ0 422 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 BEX2Q9BXY8 128 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 EXD2Q9NVH0 621 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 ASB6Q9NWX5 421 aa13.47□□□□□ -0.25
CMSS1-202ENST00000463526 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 DNAJA2O60884 412 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 FAM157CP0CG43 387 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 PGM1P36871 562 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 APOBEC1P41238 236 aaKnown RBP13.46□□□□□ -0.25
CMSS1-202ENST00000463526 DSCR9P59020 149 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 PDK3Q15120 406 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 TNFAIP8L2Q6P589 184 aaPredicted RBP13.46□□□□□ -0.25
CMSS1-202ENST00000463526 ANKRD46Q86W74 232 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 PIGXQ8TBF5 258 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 TCP10LQ8TDR4 215 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 FAM168AQ92567 244 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 CCDC106Q9BWC9 280 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 ZNF350Q9GZX5 532 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 TAS2R16Q9NYV7 291 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 CHRNA9Q9UGM1 479 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 PCDHGB4Q9UN71 923 aa13.46□□□□□ -0.25
CMSS1-202ENST00000463526 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.25
CMSS1-202ENST00000463526 PLCE1Q9P212 2302 aa13.46□□□□□ -0.26
CMSS1-202ENST00000463526 GOLGA8QA0A0J9YX86 632 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 GOLGA8OA6NCC3 632 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 CLDN24A6NM45 220 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 GOLGA8NF8WBI6 632 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 GPR171O14626 319 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 LY6HO94772 140 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 ITGA5P08648 1049 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 CLDN8P56748 225 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 LOXL1Q08397 574 aaPredicted RBP13.45□□□□□ -0.26
CMSS1-202ENST00000463526 GABRA6Q16445 453 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 ATAD3BQ5T9A4 648 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 TYW3Q6IPR3 259 aaKnown RBP13.45□□□□□ -0.26
CMSS1-202ENST00000463526 CASP12Q6UXS9 341 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 ADGRG3Q86Y34 549 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 ZG16BQ96DA0 208 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 INPP5KQ9BT40 448 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 MKS1Q9NXB0 559 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 UPB1Q9UBR1 384 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 CDC42EP3Q9UKI2 254 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 WDR45Q9Y484 360 aa13.45□□□□□ -0.26
CMSS1-202ENST00000463526 ELOA3DA6NLF2 546 aaPredicted RBP13.44□□□□□ -0.26
CMSS1-202ENST00000463526 ANKRD28O15084 1053 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 KIAA0513O60268 411 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 PMS2P2O95744 297 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 SLC25A16P16260 332 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 ZNF16P17020 682 aaPredicted RBP13.44□□□□□ -0.26
CMSS1-202ENST00000463526 MAGEA8P43361 318 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 IDH2P48735 452 aaKnown RBP13.44□□□□□ -0.26
CMSS1-202ENST00000463526 VLDLRP98155 873 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 EMX2Q04743 252 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 PDCD2Q16342 344 aaPredicted RBP13.44□□□□□ -0.26
CMSS1-202ENST00000463526 ELOA3BQ3SY89 546 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 GPAT3Q53EU6 434 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 CYB5R2Q6BCY4 276 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 OR7E24Q6IFN5 339 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 GRINAQ7Z429 371 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 ARIH2OSQ8N7S6 290 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 WDR31Q8NA23 367 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 ELOA3Q8NG57 546 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 ROPN1LQ96C74 230 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 MUS81Q96NY9 551 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 SLC35A3Q9Y2D2 325 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 HDGFL3Q9Y3E1 203 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 CUBNO60494 3623 aa13.44□□□□□ -0.26
CMSS1-202ENST00000463526 TMED7-TICAM2A0A0A6YYA0 188 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 CREB1P16220 341 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 CDH2P19022 906 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 KCNJ10P78508 379 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 SRSF2Q01130 221 aaKnown RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 FUT5Q11128 374 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 MAD2L1Q13257 205 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-202ENST00000463526 ZNF544Q6NX49 715 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 FRRS1Q6ZNA5 592 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 ARFGAP2Q8N6H7 521 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 FAM71CQ8NEG0 241 aa13.43□□□□□ -0.26
CMSS1-202ENST00000463526 C10orf105Q8TEF2 133 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms