RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 OPN1LWP04000 364 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 PNMTP11086 282 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 GGT1P19440 569 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 TCN1P20061 433 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 IFNA8P32881 189 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF136P52737 540 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 TPD52P55327 224 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 SELENOWP63302 87 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ADORA2A-AS1P86434 159 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 HOXC5Q00444 222 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 PON3Q15166 354 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 CTU2Q2VPK5 515 aaKnown RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ELOA3BQ3SY89 546 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 SWT1Q5T5J6 900 aaKnown RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 EEF1A1P5Q5VTE0 462 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 GTF2IRD2BQ6EKJ0 949 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ULK3Q6PHR2 472 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 GTF2IRD2Q86UP8 949 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ADGRG3Q86Y34 549 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 RPRMLQ8N4K4 120 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 RNF148Q8N7C7 305 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ELOA3Q8NG57 546 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 VANGL1Q8TAA9 524 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 CA5BP1Q8WTZ4 195 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 OSTF1Q92882 214 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF524Q96C55 264 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 SDCCAG3Q96C92 435 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ZHX1-C8orf76Q96EF9 292 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 SLC47A1Q96FL8 570 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 ADGRG7Q96K78 797 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 MCHR1Q99705 422 aa17.79■□□□□ 0.44
COL9A3-204ENST00000463487 PRPF19Q9UMS4 504 aaKnown RBP17.79■□□□□ 0.44
COL9A3-204ENST00000463487 DIDO1Q9BTC0 2240 aaKnown RBP17.78■□□□□ 0.44
COL9A3-204ENST00000463487 A0A0J9YW62 118 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 WIPF3A6NGB9 483 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 M0R3H8 397 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 EFNA2O43921 213 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 CXCL13O43927 109 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 STAMBPO95630 424 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF682O95780 498 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 T-ENOLP0DO92 83 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 CCNA2P20248 432 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 CPOXP36551 454 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 RASSF2P50749 326 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 SRSF1Q07955 248 aaKnown RBP eCLIP17.78■□□□□ 0.441e-9■■□□□ 11.6
COL9A3-204ENST00000463487 BNIP2Q12982 314 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 DNAL1Q4LDG9 190 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 ALG10BQ5I7T1 473 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 GLYATQ6IB77 296 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF613Q6PF04 617 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 C5orf46Q6UWT4 87 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 MARVELD2Q8N4S9 558 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 RNF217Q8TC41 542 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 C3orf49Q96BT1 292 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 POLR2J2Q9GZM3 115 aaKnown RBP17.78■□□□□ 0.44
COL9A3-204ENST00000463487 POLR2J3Q9H1A7 115 aaKnown RBP17.78■□□□□ 0.44
COL9A3-204ENST00000463487 EGFL7Q9UHF1 273 aa17.78■□□□□ 0.44
COL9A3-204ENST00000463487 SAMD4AQ9UPU9 718 aaKnown RBP17.78■□□□□ 0.44
COL9A3-204ENST00000463487 A0A1B0GWA3 101 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 A8MVM7 634 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 SULT2B1O00204 365 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 GYG2O15488 501 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 SERPINA1P01009 418 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 CRHP06850 196 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 CRYBA2P53672 197 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 RAC3P60763 192 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 OR1Q1Q15612 314 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 C6orf89Q6UWU4 347 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 RINLQ6ZS11 566 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 NCCRP1Q6ZVX7 275 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-204ENST00000463487 FKBP9P1Q75LS8 142 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 ATG4DQ86TL0 474 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-204ENST00000463487 COMTD1Q86VU5 262 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 CARM1Q86X55 608 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 MCEMP1Q8IX19 187 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 OR6T1Q8NGN1 323 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 ITLN2Q8WWU7 325 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-204ENST00000463487 GEMIN6Q8WXD5 167 aaKnown RBP17.77■□□□□ 0.44
COL9A3-204ENST00000463487 ZNF845Q96IR2 970 aaPredicted RBP17.77■□□□□ 0.44
COL9A3-204ENST00000463487 MUC13Q9H3R2 512 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 GLRX2Q9NS18 164 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 CD300AQ9UGN4 299 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 SNX13Q9Y5W8 968 aa17.77■□□□□ 0.44
COL9A3-204ENST00000463487 ARHGAP21Q5T5U3 1957 aa17.77■□□□□ 0.43
COL9A3-204ENST00000463487 DVL2O14641 736 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 DNPH1O43598 174 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 ATP5HO75947 161 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 RCBTB2O95199 551 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 PMS2P2O95744 297 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 PLGP00747 810 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 TMIGD3P0DMS9 266 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 NCK1P16333 377 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 HTR2AP28223 471 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 SHC1P29353 583 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 CEACAM8P31997 349 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 DIO1P49895 249 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 ZNF239Q16600 458 aaKnown RBP17.76■□□□□ 0.43
COL9A3-204ENST00000463487 TMPPEQ6ZT21 453 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 CBLL1Q75N03 491 aa17.76■□□□□ 0.43
COL9A3-204ENST00000463487 SLC43A2Q8N370 569 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms