RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 CACNG6Q9BXT2 260 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 CTPS2Q9NRF8 586 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 CBLN4Q9NTU7 201 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 PARPBPQ9NWS1 579 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 KCNE5Q9UJ90 142 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 B3GALT5Q9Y2C3 310 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 CSPG4Q6UVK1 2322 aa13.58□□□□□ -0.24
SKA3-204ENST00000462482 RAI1Q7Z5J4 1906 aaPredicted RBP13.57□□□□□ -0.24
SKA3-204ENST00000462482 RNF212BA8MTL3 300 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 A8MV72 311 aaPredicted RBP13.57□□□□□ -0.24
SKA3-204ENST00000462482 M0R1B8 84 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 EIF1BO60739 113 aaKnown RBP13.57□□□□□ -0.24
SKA3-204ENST00000462482 NDUFS7O75251 213 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 CD8AP01732 235 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 UQCRBP14927 111 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 TTKP33981 857 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 FABP6P51161 128 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 CLNS1AP54105 237 aaKnown RBP13.57□□□□□ -0.24
SKA3-204ENST00000462482 CASP9P55211 416 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 TGFBR3Q03167 851 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 CHRFAM7AQ494W8 412 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 ZNF524Q96C55 264 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 ROPN1LQ96C74 230 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 PPP1R36Q96LQ0 422 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 NAA11Q9BSU3 229 aaPredicted RBP13.57□□□□□ -0.24
SKA3-204ENST00000462482 CCDC106Q9BWC9 280 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 EXOSC3Q9NQT5 275 aaKnown RBP13.57□□□□□ -0.24
SKA3-204ENST00000462482 NPAP1Q9NZP6 1156 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 UPB1Q9UBR1 384 aa13.57□□□□□ -0.24
SKA3-204ENST00000462482 ROS1P08922 2347 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 GOLGA8QA0A0J9YX86 632 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 CENPVL1A0A0U1RR11 272 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 GOLGA8OA6NCC3 632 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 GOLGA8NF8WBI6 632 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 SNUPNO95149 360 aaKnown RBP13.56□□□□□ -0.24
SKA3-204ENST00000462482 CCNA2P20248 432 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 PTNP21246 168 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 EDNRAP25101 427 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 CD40P25942 277 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 PGM1P36871 562 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 SLC35A1P78382 337 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 KCNJ10P78508 379 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 CHRNB3Q05901 458 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 MAPK14Q16539 360 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 DPY19L1Q2PZI1 675 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 TYW3Q6IPR3 259 aaKnown RBP13.56□□□□□ -0.24
SKA3-204ENST00000462482 CASP12Q6UXS9 341 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 OLIG3Q7RTU3 272 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 ANKRD46Q86W74 232 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 HIPK1Q86Z02 1210 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 MUC15Q8N387 334 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 TRIML2Q8N7C3 387 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 PMM1Q92871 262 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 RAB8BQ92930 207 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 AKTIPQ9H8T0 292 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 FKRPQ9H9S5 495 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 TMEM181Q9P2C4 612 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
SKA3-204ENST00000462482 TRAPPC4Q9Y296 219 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 SLC9A8Q9Y2E8 581 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 USF3Q68DE3 2245 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 TLN2Q9Y4G6 2542 aa13.56□□□□□ -0.24
SKA3-204ENST00000462482 DNHD1Q96M86 4753 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 FAM234BA2RU67 622 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 WDR91A4D1P6 747 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 ZNF716A6NP11 495 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 SERPINE1P05121 402 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 THBS1P07996 1170 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 ARRB2P32121 409 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 IDH2P48735 452 aaKnown RBP13.55□□□□□ -0.24
SKA3-204ENST00000462482 SLC16A1P53985 500 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 TXNL4AP83876 142 aaKnown RBP13.55□□□□□ -0.24
SKA3-204ENST00000462482 ZNF544Q6NX49 715 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 KLHL24Q6TFL4 600 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 DNM1P46Q6ZS02 220 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 CMIPQ8IY22 773 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 FAM71CQ8NEG0 241 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 NEURL3Q96EH8 262 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 DNAJA3Q96EY1 480 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 ARL5BQ96KC2 179 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 OR11A1Q9GZK7 315 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 SAP130Q9H0E3 1048 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 MALT1Q9UDY8 824 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 AMDHD2Q9Y303 409 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 SLC25A15Q9Y619 301 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 ATP23Q9Y6H3 246 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 PMF1-BGLAPU3KQ54 211 aa13.55□□□□□ -0.24
SKA3-204ENST00000462482 TMED7-TICAM2A0A0A6YYA0 188 aa13.54□□□□□ -0.24
SKA3-204ENST00000462482 E7EQL1 145 aa13.54□□□□□ -0.24
SKA3-204ENST00000462482 SLC25A16P16260 332 aa13.54□□□□□ -0.24
SKA3-204ENST00000462482 LBPP18428 481 aa13.54□□□□□ -0.24
SKA3-204ENST00000462482 S100A3P33764 101 aa13.54□□□□□ -0.24
SKA3-204ENST00000462482 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
SKA3-204ENST00000462482 POLR2HP52434 150 aaKnown RBP13.54□□□□□ -0.24
SKA3-204ENST00000462482 MAP2K6P52564 334 aa13.54□□□□□ -0.24
SKA3-204ENST00000462482 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
SKA3-204ENST00000462482 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms