RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 APH1AQ96BI3 265 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 ZG16BQ96DA0 208 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 REPIN1Q9BWE0 567 aaKnown RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 CACNG6Q9BXT2 260 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 OR11A1Q9GZK7 315 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 AKTIPQ9H8T0 292 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 CHRNA9Q9UGM1 479 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 SLC35A3Q9Y2D2 325 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 NOSIPQ9Y314 301 aaKnown RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 SPIN1Q9Y657 262 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 CIB4A0PJX0 185 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 PRAMEF27A3QJZ7 478 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 CPSF4O95639 269 aaKnown RBP14.17□□□□□ -0.14
COL7A1-204ENST00000462475 PMS2P2O95744 297 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 C1QCP02747 245 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 APOBEC1P41238 236 aaKnown RBP14.17□□□□□ -0.14
COL7A1-204ENST00000462475 ZNF83P51522 516 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 VSNL1P62760 191 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 CHRNEQ04844 493 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 SMU1Q2TAY7 513 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 ATAD3BQ5T9A4 648 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 AGAP6Q5VW22 663 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 SAXO2Q658L1 398 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 C11orf71Q6IPW1 123 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 B3GLCTQ6Y288 498 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 GRINAQ7Z429 371 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 CCDC103Q8IW40 242 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 ROPN1LQ96C74 230 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 ZHX1-C8orf76Q96EF9 292 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 DPY30Q9C005 99 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 SAP130Q9H0E3 1048 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 POLE3Q9NRF9 147 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 MALT1Q9UDY8 824 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 PCDHGB4Q9UN71 923 aa14.17□□□□□ -0.14
COL7A1-204ENST00000462475 A0A096LNT2 108 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 WDR91A4D1P6 747 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 CCT8L1PA6NM43 557 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 GPRIN2O60269 458 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 AGR2O95994 175 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 GUSBP08236 651 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 CCNA2P20248 432 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 UQCRC2P22695 453 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 CD40P25942 277 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 TTKP33981 857 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 NUDT6P53370 316 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 SLC16A1P53985 500 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 NRF1Q16656 503 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 HMBOX1Q6NT76 420 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 SLC22A25Q6T423 547 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 TMEM108Q6UXF1 575 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 NUDCD3Q8IVD9 361 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 OR52E4Q8NGH9 312 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 PIGXQ8TBF5 258 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 OIT3Q8WWZ8 545 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 HTRA1Q92743 480 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 NEURL3Q96EH8 262 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 RADILQ96JH8 1075 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 ZIM3Q96PE6 472 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 ROPN1BQ9BZX4 212 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-204ENST00000462475 ROPN1Q9HAT0 212 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-204ENST00000462475 ASB6Q9NWX5 421 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 TAS2R16Q9NYV7 291 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 POU2F3Q9UKI9 436 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 HDGFL3Q9Y3E1 203 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 RTTNQ86VV8 2226 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 SVEP1Q4LDE5 3571 aa14.16□□□□□ -0.14
COL7A1-204ENST00000462475 PRSS51A0A1B0GVH4 220 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 M0R1B8 84 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 AP3D1O14617 1153 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 ANKRD28O15084 1053 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 DNPH1O43598 174 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 SERPINE1P05121 402 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 ITGA5P08648 1049 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 DHRS4L1P0CG22 281 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 PTAFRP25105 342 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 KHKP50053 298 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 OR2B6P58173 313 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 KCNJ10P78508 379 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 CASP8Q14790 479 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 CHI3L2Q15782 390 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 SPANXN4Q5MJ08 99 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 ADGRG3Q86Y34 549 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 HIPK1Q86Z02 1210 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 CNOT9Q92600 299 aaKnown RBP14.15□□□□□ -0.14
COL7A1-204ENST00000462475 TESCQ96BS2 214 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 ADAD1Q96M93 576 aaKnown RBP14.15□□□□□ -0.14
COL7A1-204ENST00000462475 DHRS9Q9BPW9 319 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 RHNO1Q9BSD3 238 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 C20orf27Q9GZN8 174 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 EXOSC3Q9NQT5 275 aaKnown RBP14.15□□□□□ -0.14
COL7A1-204ENST00000462475 CBLN4Q9NTU7 201 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 MARCOQ9UEW3 520 aaPredicted RBP14.15□□□□□ -0.14
COL7A1-204ENST00000462475 MGAT4BQ9UQ53 548 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 PLCE1Q9P212 2302 aa14.15□□□□□ -0.14
COL7A1-204ENST00000462475 FAM234BA2RU67 622 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 PDLIM1O00151 329 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 GPR171O14626 319 aa14.14□□□□□ -0.15
COL7A1-204ENST00000462475 MRPL33O75394 65 aaKnown RBP14.14□□□□□ -0.15
COL7A1-204ENST00000462475 CHI3L1P36222 383 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms