RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 HOXB9P17482 250 aaPredicted RBP16.79■□□□□ 0.28
COL5A1-203ENST00000460264 FKBP2P26885 142 aaKnown RBP16.79■□□□□ 0.28
COL5A1-203ENST00000460264 HTR3AP46098 478 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 OR3A2P47893 321 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 CRISP3P54108 245 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 STX1BP61266 288 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 PPP2R2AP63151 447 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 FOXD4Q12950 439 aaPredicted RBP16.79■□□□□ 0.28
COL5A1-203ENST00000460264 TSC22D1Q15714 1073 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 SLC2A7Q6PXP3 512 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 MTDHQ86UE4 582 aaKnown RBP16.79■□□□□ 0.28
COL5A1-203ENST00000460264 WFDC8Q8IUA0 241 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 SLC38A5Q8WUX1 472 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 S100PBPQ96BU1 408 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 DNAJA3Q96EY1 480 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 PAIP1Q9H074 479 aaKnown RBP16.79■□□□□ 0.28
COL5A1-203ENST00000460264 RLIMQ9NVW2 624 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 CALML5Q9NZT1 146 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 HDGFL3Q9Y3E1 203 aa16.79■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF469Q96JG9 3925 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-203ENST00000460264 TMED7-TICAM2A0A0A6YYA0 188 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 CDHR4A6H8M9 788 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 CFAP73A6NFT4 308 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ADAP00813 363 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 EDNRAP25101 427 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 CLK1P49759 484 aaKnown RBP16.78■□□□□ 0.28
COL5A1-203ENST00000460264 POLR2HP52434 150 aaKnown RBP16.78■□□□□ 0.28
COL5A1-203ENST00000460264 EPS8Q12929 822 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 P2RY6Q15077 328 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ACKR1Q16570 336 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 LIN52Q52LA3 116 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 SFRP5Q5T4F7 317 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF836Q6ZNA1 936 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 LSRQ86X29 649 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-203ENST00000460264 VRK2Q86Y07 508 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF440Q8IYI8 595 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 OR52P1PQ8NH57 321 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 DYDC1Q8WWB3 177 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF775Q96BV0 537 aaPredicted RBP16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ZHX1-C8orf76Q96EF9 292 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 TMEM19Q96HH6 336 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 CCDC28BQ9BUN5 200 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 HDHD5Q9BXW7 423 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 PRSS50Q9UI38 385 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 OSGIN1Q9UJX0 560 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 TMED7Q9Y3B3 224 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 PCDHB14Q9Y5E9 798 aa16.78■□□□□ 0.28
COL5A1-203ENST00000460264 ARID1AO14497 2285 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 IGKV3D-15A0A087WSY6 115 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF716A6NP11 495 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
COL5A1-203ENST00000460264 DNPH1O43598 174 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 UQCRBP14927 111 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 CCNA2P20248 432 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 FPR1P21462 350 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 IL32P24001 234 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 TACR3P29371 465 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 SLC1A3P43003 542 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 NR1H2P55055 460 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 RIPPLY3P57055 190 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 PDK3Q15120 406 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 RPS26P11Q5JNZ5 115 aaPredicted RBP16.77■□□□□ 0.28
COL5A1-203ENST00000460264 Q6ZT83 130 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 HDXQ7Z353 690 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 GALNT5Q7Z7M9 940 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 KRTAP1-3Q8IUG1 177 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 FUNDC1Q8IVP5 155 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 KISS1RQ969F8 398 aaPredicted RBP16.77■□□□□ 0.28
COL5A1-203ENST00000460264 PLPPR2Q96GM1 343 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 PIP5K1AQ99755 562 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 THUMPD1Q9NXG2 353 aaKnown RBP16.77■□□□□ 0.28
COL5A1-203ENST00000460264 EMC3Q9P0I2 261 aa16.77■□□□□ 0.28
COL5A1-203ENST00000460264 ZNF443Q9Y2A4 671 aaPredicted RBP16.77■□□□□ 0.28
COL5A1-203ENST00000460264 A0A096LPI6 279 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 TMEM72A0PK05 275 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 NR5A2O00482 541 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 ZNF208O43345 1280 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 THBS1P07996 1170 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 NUDT7P0C024 238 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 HOXC12P31275 282 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 ACAA2P42765 397 aaKnown RBP16.76■□□□□ 0.27
COL5A1-203ENST00000460264 AQP5P55064 265 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 ITGADQ13349 1161 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 RGNQ15493 299 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 RNF220Q5VTB9 566 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 BLOC1S3Q6QNY0 202 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 ZNF704Q6ZNC4 412 aaPredicted RBP16.76■□□□□ 0.27
COL5A1-203ENST00000460264 C20orf204Q6ZNR8 217 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.76■□□□□ 0.27
COL5A1-203ENST00000460264 WFDC11Q8NEX6 87 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 PIGXQ8TBF5 258 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 PIGTQ969N2 578 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 DDIT4LQ96D03 193 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 CCL19Q99731 98 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 VIPAS39Q9H9C1 493 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 A4GALTQ9NPC4 353 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 DLL4Q9NR61 685 aa16.76■□□□□ 0.27
COL5A1-203ENST00000460264 INTS9Q9NV88 658 aaKnown RBP16.76■□□□□ 0.27
COL5A1-203ENST00000460264 SLC25A37Q9NYZ2 338 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms