RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 ADPRHL2Q9NX46 363 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 BAG5Q9UL15 447 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 AP4B1Q9Y6B7 739 aa13.19□□□□□ -0.3
VPS16-205ENST00000453689 TPST1O60507 370 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 STAMBPO95630 424 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 SERPINA1P01009 418 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 FESP07332 822 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 C8BP07358 591 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 SLC6A8P48029 635 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 ZNF136P52737 540 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 CBFBQ13951 182 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 DUSP7Q16829 419 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 POMZP3Q6PJE2 187 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 CBLL1Q75N03 491 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 CHMP1BQ7LBR1 199 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 ZNF550Q7Z398 422 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 GGNQ86UU5 652 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 LZICQ8WZA0 190 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 PROX1Q92786 737 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 WNT2BQ93097 391 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 STOML1Q9UBI4 398 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 RPS6KA6Q9UK32 745 aa13.18□□□□□ -0.3
VPS16-205ENST00000453689 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
VPS16-205ENST00000453689 CFAP73A6NFT4 308 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 RCBTB2O95199 551 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 ZNF682O95780 498 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 TGM6O95932 706 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 LGI1O95970 557 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
VPS16-205ENST00000453689 UQCRBP14927 111 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 PRKCAP17252 672 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 PGCP20142 388 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 IL11P20809 199 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 BMP5P22003 454 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 CTSSP25774 331 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 EIF1P41567 113 aaKnown RBP13.17□□□□□ -0.3
VPS16-205ENST00000453689 RAC1P63000 192 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 SELENOWP63302 87 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 EPS8Q12929 822 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 TRAP1Q12931 704 aaKnown RBP13.17□□□□□ -0.3
VPS16-205ENST00000453689 NRF1Q16656 503 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 MTX3Q5HYI7 312 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 LCN8Q6JVE9 175 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 COMTD1Q86VU5 262 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 ZNF845Q96IR2 970 aaPredicted RBP13.17□□□□□ -0.3
VPS16-205ENST00000453689 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 ARHGDIGQ99819 225 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 TMEM185BQ9H7F4 350 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
VPS16-205ENST00000453689 DCAF13Q9NV06 445 aaKnown RBP13.17□□□□□ -0.3
VPS16-205ENST00000453689 PRDM4Q9UKN5 801 aa13.17□□□□□ -0.3
VPS16-205ENST00000453689 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 FAAHO00519 579 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 EIF1AYO14602 144 aaKnown RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 DVL2O14641 736 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ACOT8O14734 319 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 FRS3O43559 492 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 EFNA2O43921 213 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 NTN1O95631 604 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 OPN1LWP04000 364 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 COX6B1P14854 86 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ELK4P28324 431 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ADH6P28332 368 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 AGFG1P52594 562 aaKnown RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 RGS8P57771 180 aaPredicted RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 RPS3AP61247 264 aaKnown RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 MS4A2Q01362 244 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 FOXF2Q12947 444 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 QPRTQ15274 297 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 CTU2Q2VPK5 515 aaKnown RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 SLC25A53Q5H9E4 307 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 P4HA3Q7Z4N8 544 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 DHFR2Q86XF0 187 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 TPD52L3Q96J77 140 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ADGRG7Q96K78 797 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 MRGPRX4Q96LA9 322 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 TRIM15Q9C019 465 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 ZNF629Q9UEG4 869 aaPredicted RBP13.16□□□□□ -0.3
VPS16-205ENST00000453689 SLC7A8Q9UHI5 535 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 SLC9A8Q9Y2E8 581 aa13.16□□□□□ -0.3
VPS16-205ENST00000453689 SLC22A20A6NK97 555 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 M0R3H8 397 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 ETV2O00321 342 aaPredicted RBP13.15□□□□□ -0.3
VPS16-205ENST00000453689 AP3D1O14617 1153 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 ADAM11O75078 769 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 GKN3PP0CG01 181 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 PRG2P13727 222 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 SHC1P29353 583 aa13.15□□□□□ -0.3
VPS16-205ENST00000453689 RYKP34925 604 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms