RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	PRKCA	P17252	672 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	GSTM3	P21266	225 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	ACVR1B	P36896	505 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	RANBP1	P43487	201 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	RUNDC3A	Q59EK9	446 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	PRAMEF9	Q5VWM5	478 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	IGFN1	Q86VF2	1251 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	SPNS2	Q8IVW8	549 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	LSM14A	Q8ND56	463 aa	Known RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	OR10D3	Q8NH80	312 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	MAL2	Q969L2	176 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544		Q96MT0	163 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	DCLRE1C	Q96SD1	692 aa	Known RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	EBF4	Q9BQW3	602 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	QRSL1	Q9H0R6	528 aa	Known RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	GLRX2	Q9NS18	164 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	FBXO34	Q9NWN3	711 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	PDP1	Q9P0J1	537 aa	Predicted RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	NOP16	Q9Y3C1	178 aa	Known RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	DHRS12	A0PJE2	317 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	MYL12B	O14950	172 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	DNAJC8	O75937	253 aa	Predicted RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	MT-ND1	P03886	318 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	H2BFM	P0C1H6	154 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	CA5A	P35218	305 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	GNB2	P62879	340 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	SNCB	Q16143	134 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	TBC1D28	Q2M2D7	210 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	FAM71E1	Q6IPT2	247 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	LRRC18	Q8N456	261 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	OR6N2	Q8NGY6	317 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	SPTSSA	Q969W0	71 aa		7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544	SIDT1	Q9NXL6	827 aa	Known RBP	7.72	□□□□□ -1.17
HCG18-238	ENST00000449544		A0A087WV62	115 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	SDHD	O14521	159 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	HSMCR30	P0CW71	290 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	SNTB1	Q13884	538 aa	Known RBP	7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	ZSCAN26	Q16670	478 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	ZNF572	Q7Z3I7	529 aa	Predicted RBP	7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	CAMKMT	Q7Z624	323 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	GIPC3	Q8TF64	312 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	CNRIP1	Q96F85	164 aa	Predicted RBP	7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	WBP1	Q96G27	269 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	TGIF2	Q9GZN2	237 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	NMUR2	Q9GZQ4	415 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	DNAJC27	Q9NZQ0	273 aa		7.71	□□□□□ -1.17
HCG18-238	ENST00000449544	PCNT	O95613	3336 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	HIVEP2	P31629	2446 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	ABCA2	Q9BZC7	2435 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	PRAMEF27	A3QJZ7	478 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	KCNK2	O95069	426 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	CBX6	O95503	412 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	RECK	O95980	971 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	TGM1	P22735	817 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	HTR5A	P47898	357 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	TEK	Q02763	1124 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	SCRN3	Q0VDG4	424 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	FOXF1	Q12946	379 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	PCOLCE	Q15113	449 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	VMAC	Q2NL98	169 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	RASSF6	Q6ZTQ3	369 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	PTCHD4	Q6ZW05	846 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	KDM8	Q8N371	416 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	LINC00471	Q8N535	108 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	ABHD5	Q8WTS1	349 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	ZNF570	Q96NI8	536 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	ZFP3	Q96NJ6	502 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	SARG	Q9BW04	601 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	TSSK6	Q9BXA6	273 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	UCK2	Q9BZX2	261 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	CLN6	Q9NWW5	311 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	USP22	Q9UPT9	525 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	FAM96B	Q9Y3D0	163 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	CLCA1	A8K7I4	914 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	PPIH	O43447	177 aa	Known RBP	7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	STS	P08842	583 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	CASP3	P42574	277 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	LGALS4	P56470	323 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	PPP3R1	P63098	170 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	CEBPE	Q15744	281 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	C1orf140	Q5VVS0	124 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	LIPN	Q5VXI9	398 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	ZNF793	Q6ZN11	406 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	VRK2	Q86Y07	508 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	NEIL3	Q8TAT5	605 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	MARVELD3	Q96A59	401 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	ACTR6	Q9GZN1	396 aa		7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	PLEKHB1	Q9UF11	243 aa	Predicted RBP	7.71	□□□□□ -1.18
HCG18-238	ENST00000449544	POLQ	O75417	2590 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	OR2M5	A3KFT3	312 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	OR14I1	A6ND48	311 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	SHISA8	B8ZZ34	492 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544		G3V2L1	256 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	OXSR1	O95747	527 aa	Predicted RBP	7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	KRT8	P05787	483 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	RAC1	P63000	192 aa		7.7	□□□□□ -1.18
HCG18-238	ENST00000449544	BEX5	Q5H9J7	111 aa		7.7	□□□□□ -1.18

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