RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 MRPL17Q9NRX2 175 aaKnown RBP17.79■□□□□ 0.44
HMGA1-205ENST00000447654 PCDHGA5Q9Y5G8 931 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 OR6C74A6NCV1 312 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 TMEM200CA6NKL6 621 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 H0YIV9 168 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 IL3P08700 152 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 EPXP11678 715 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 ACP5P13686 325 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 RCC1P18754 421 aaPredicted RBP17.79■□□□□ 0.44
HMGA1-205ENST00000447654 BDKRB2P30411 391 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 TIA1P31483 386 aaKnown RBP eCLIP17.79■□□□□ 0.447e-6■■■□□ 17.4
HMGA1-205ENST00000447654 NPBWR1P48145 328 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 RGS19P49795 217 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 NRG3P56975 720 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 FABP9Q0Z7S8 132 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 PDE7AQ13946 482 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 UBE2R2Q712K3 238 aaPredicted RBP17.79■□□□□ 0.44
HMGA1-205ENST00000447654 ACBD7Q8N6N7 88 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 OR1S2Q8NGQ3 325 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 OR5W2Q8NH69 310 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 ABHD4Q8TB40 342 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 MTERF1Q99551 399 aaKnown RBP17.79■□□□□ 0.44
HMGA1-205ENST00000447654 TEX101Q9BY14 249 aa17.79■□□□□ 0.44
HMGA1-205ENST00000447654 DHCR7Q9UBM7 475 aaKnown RBP17.79■□□□□ 0.44
HMGA1-205ENST00000447654 MYOFQ9NZM1 2061 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 UPK3BL1B0FP48 263 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 UPK3BL2E5RIL1 263 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 TERTO14746 1132 aaKnown RBP17.78■□□□□ 0.44
HMGA1-205ENST00000447654 LILRB3O75022 631 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 CD63P08962 238 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF44P15621 663 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 KCNAB1Q14722 419 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF385BQ569K4 471 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF805Q5CZA5 627 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 NKAPLQ5M9Q1 402 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 JMJD6Q6NYC1 403 aaPredicted RBP17.78■□□□□ 0.44
HMGA1-205ENST00000447654 ABHD13Q7L211 337 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 LINGO2Q7L985 606 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 MORN4Q8NDC4 146 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 FNDC11Q9BVV2 318 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 TLNRD1Q9H1K6 362 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 MVB12BQ9H7P6 319 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
HMGA1-205ENST00000447654 TRBV5-4A0A0C4DH59 114 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 NPIPB9F8W1W9 429 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 BLOC1S5-TXNDC5H3BN57 136 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 PRAMEF4O60810 478 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 EPHB3P54753 998 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 ILF3Q12906 894 aaKnown RBP eCLIP17.77■□□□□ 0.442e-9■□□□□ 8.4
HMGA1-205ENST00000447654 PRAMEF9Q5VWM5 478 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 HEPHL1Q6MZM0 1159 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 FAM83HQ6ZRV2 1179 aaPredicted RBP17.77■□□□□ 0.44
HMGA1-205ENST00000447654 PRSS45Q7RTY3 260 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 ZNF546Q86UE3 836 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 DCUN1D3Q8IWE4 304 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 WDR77Q9BQA1 342 aaPredicted RBP17.77■□□□□ 0.44
HMGA1-205ENST00000447654 GPR52Q9Y2T5 361 aa17.77■□□□□ 0.44
HMGA1-205ENST00000447654 CCDC88CQ9P219 2028 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 SLC16A5O15375 505 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 TGM5O43548 720 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 ATF1P18846 271 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 ACHEP22303 614 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 UQCRC2P22695 453 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 CERS1P27544 350 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 GABRR2P28476 465 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 FAUP35544 74 aaKnown RBP17.77■□□□□ 0.43
HMGA1-205ENST00000447654 ATP6V1E1P36543 226 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 HTR5AP47898 357 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 CASP9P55211 416 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 RHOAP61586 193 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 IRF8Q02556 426 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 RBMS2Q15434 407 aaKnown RBP17.77■□□□□ 0.43
HMGA1-205ENST00000447654 DNLZQ5SXM8 178 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 IL34Q6ZMJ4 242 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 KRT77Q7Z794 578 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 POMGNT2Q8NAT1 580 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 STK35Q8TDR2 534 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 TRIM43Q96BQ3 446 aaPredicted RBP17.77■□□□□ 0.43
HMGA1-205ENST00000447654 MRPL38Q96DV4 380 aaKnown RBP17.77■□□□□ 0.43
HMGA1-205ENST00000447654 ZNF607Q96SK3 696 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 ADAT1Q9BUB4 502 aaKnown RBP17.77■□□□□ 0.43
HMGA1-205ENST00000447654 PLA2G12AQ9BZM1 189 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 CRISPLD2Q9H0B8 497 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 IRAK3Q9Y616 596 aa17.77■□□□□ 0.43
HMGA1-205ENST00000447654 LRIT2A6NDA9 550 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 E7EQ34 232 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 GOSR2O14653 212 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SNRPBP14678 240 aaKnown RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SORDQ00796 357 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 IQCHQ86VS3 1027 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 ZSCAN1Q8NBB4 408 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 OR52I2Q8NH67 350 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 EDAQ92838 391 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 OCSTAMPQ9BR26 566 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 SIRT4Q9Y6E7 314 aaPredicted RBP17.76■□□□□ 0.43
HMGA1-205ENST00000447654 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 ANHXE9PGG2 379 aa17.76■□□□□ 0.43
HMGA1-205ENST00000447654 E9PI62 339 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms