RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 OR2T29Q8NH02 315 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 TMEM255BQ8WV15 326 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 GPR137Q96N19 417 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZNF347Q96SE7 839 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 OR11A1Q9GZK7 315 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 YY1AP1Q9H869 796 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 S100A14Q9HCY8 104 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 ARMC1Q9NVT9 282 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 CHRNA9Q9UGM1 479 aa16.23■□□□□ 0.19
TRAPPC4-203ENST00000447216 IGKV1D-42A0A075B6H8 117 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 A0A087WUJ7 227 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 A0A1B0GTH9 108 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZC3H12DA2A288 527 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 HCN1O60741 890 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 PRB1P04280 392 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 POU3F2P20265 443 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 CHMP24386 653 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 ELK4P28324 431 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 TDGF1P3P51864 188 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 SELENBP1Q13228 472 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 TRAM2Q15035 370 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 C3AR1Q16581 482 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 FGD3Q5JSP0 725 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 ZFP1Q6P2D0 407 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 LSM14AQ8ND56 463 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 LRTOMTQ8WZ04 291 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 STMN2Q93045 179 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 ABTB1Q969K4 478 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 DHRS1Q96LJ7 313 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 C12orf10Q9HB07 376 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 SERINC1Q9NRX5 453 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 PLSCR2Q9NRY7 297 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 PRDM4Q9UKN5 801 aa16.22■□□□□ 0.19
TRAPPC4-203ENST00000447216 TRBV4-1A0A0J9YWV2 114 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 A0A1B0GVC2 190 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 H0YC42 278 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 PIP5K1CO60331 668 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 GADD45GO95257 159 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 TFPIP10646 304 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 THRBP10828 461 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 PNMTP11086 282 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 HOXB6P17509 224 aaKnown RBP16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 GCKP35557 465 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 LHX2P50458 406 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 IST1P53990 364 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 UGT2B15P54855 530 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 TPD52P55327 224 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 CLDN20P56880 219 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 LSM11P83369 360 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 CRYZQ08257 329 aaKnown RBP16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 TMEM176BQ3YBM2 270 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 SWT1Q5T5J6 900 aaKnown RBP16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 C1QL3Q5VWW1 255 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 HMBOX1Q6NT76 420 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 C3orf33Q6P1S2 294 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 AAGABQ6PD74 315 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 LINC00114Q6XXX2 140 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 FGD2Q7Z6J4 655 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 AMIGO2Q86SJ2 522 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 C10orf67Q8IYJ2 551 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 UBQLNLQ8IYU4 475 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 LILRA2Q8N149 483 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 GHDCQ8N2G8 530 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 CPT1CQ8TCG5 803 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 SLX1AQ9BQ83 275 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 AGPAT4Q9NRZ5 378 aa16.21■□□□□ 0.19
TRAPPC4-203ENST00000447216 A0A1W2PNR3 127 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 NPIPA2E9PIF3 369 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 NPIPA3F8WFD2 350 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 H0YHG0 523 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 TNFRSF11BO00300 401 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 KPNA4O00629 521 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 AQP7O14520 342 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 GNGT2O14610 69 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 CLOCKO15516 846 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 SEC14L5O43304 696 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 HNRNPRO43390 633 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 KALRNO60229 2985 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 RAC1P63000 192 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 SRYQ05066 204 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 EGR4Q05215 589 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 C19orf57Q0VDD7 668 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 EXOC3L2Q2M3D2 409 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 SYT14P1Q58G82 188 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 VASNQ6EMK4 673 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 PODNL1Q6PEZ8 512 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 TBPL2Q6SJ96 375 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 CHERPQ8IWX8 916 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 PFN4Q8NHR9 129 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 MPP4Q96JB8 637 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 ARL5BQ96KC2 179 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 TIMP4Q99727 224 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 BARD1Q99728 777 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 PKP2Q99959 881 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 DNAJB9Q9UBS3 223 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 RRP15Q9Y3B9 282 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 SAMHD1Q9Y3Z3 626 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 LYVE1Q9Y5Y7 322 aa16.2■□□□□ 0.18
TRAPPC4-203ENST00000447216 SPIN1Q9Y657 262 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms