RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 WBP2NLQ6ICG8 309 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 JAM3Q9BX67 310 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 ASPNQ9BXN1 380 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 FBXL4Q9UKA2 621 aa15.97■□□□□ 0.15
SMC6-206ENST00000446852 MRTO4Q9UKD2 239 aaKnown RBP15.97■□□□□ 0.15
SMC6-206ENST00000446852 CCDC182A6NF36 153 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 RIIAD1A6NNX1 92 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 GTPBP1O00178 669 aaKnown RBP15.96■□□□□ 0.15
SMC6-206ENST00000446852 TO15178 435 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 TSPAN2O60636 221 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 PEPDP12955 493 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 GXYLT1Q4G148 440 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 KLHL12Q53G59 568 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 HLA-DQA1Q5Y7H0 255 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 ATG4DQ86TL0 474 aaPredicted RBP15.96■□□□□ 0.15
SMC6-206ENST00000446852 SNX29P2Q8IUI4 249 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 C1orf210Q8IVY1 113 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 ZFP41Q8N8Y5 198 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 ZNF441Q8N8Z8 693 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 PSD4Q8NDX1 1056 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 C7orf57Q8NEG2 295 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 OR5M3Q8NGP4 307 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 ISYNA1Q9NPH2 558 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 BAIAP2Q9UQB8 552 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 SF3B6Q9Y3B4 125 aaKnown RBP15.96■□□□□ 0.15
SMC6-206ENST00000446852 MCIDASD6RGH6 385 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 SCRG1O75711 98 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 SLC2A5P22732 501 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 IL12BP29460 328 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 RPS19P39019 145 aaKnown RBP15.96■□□□□ 0.15
SMC6-206ENST00000446852 RPS25P62851 125 aaKnown RBP15.96■□□□□ 0.15
SMC6-206ENST00000446852 NKAIN1Q4KMZ8 207 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 SLC29A4Q7RTT9 530 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 TMEM99Q8N816 258 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 CHRNA9Q9UGM1 479 aa15.96■□□□□ 0.15
SMC6-206ENST00000446852 ZNF670-ZNF695F2Z2N8 137 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 NDUFB2O95178 105 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 PAICSP22234 425 aaKnown RBP15.95■□□□□ 0.14
SMC6-206ENST00000446852 ABCD3P28288 659 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 IFITM3Q01628 133 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ZNF117Q03924 483 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 PLCXD2Q0VAA5 305 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 TMED1Q13445 227 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 Q6ZNX1 250 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 OMA1Q96E52 524 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ERMAPQ96PL5 475 aaPredicted RBP15.95■□□□□ 0.14
SMC6-206ENST00000446852 TEAD3Q99594 435 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 OR51V1Q9H2C8 321 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 TXNL4BQ9NX01 149 aaKnown RBP15.95■□□□□ 0.14
SMC6-206ENST00000446852 SSR3Q9UNL2 185 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ELOA3DA6NLF2 546 aaPredicted RBP15.95■□□□□ 0.14
SMC6-206ENST00000446852 C12orf71A8MTZ7 269 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 PLD2O14939 933 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 GYPBP06028 91 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ZNF3P17036 446 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 HK1P19367 917 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ELOA3BQ3SY89 546 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ARHGAP11AQ6P4F7 1023 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 KLHL36Q8N4N3 616 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ELOA3Q8NG57 546 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 NAT6Q93015 286 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 TIMP4Q99727 224 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 TM9SF2Q99805 663 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 RERGLQ9H628 205 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 APMAPQ9HDC9 416 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 TOR4AQ9NXH8 423 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 RARRES3Q9UL19 164 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 ADAM18Q9Y3Q7 739 aa15.95■□□□□ 0.14
SMC6-206ENST00000446852 IDSB3KWA1 339 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 GMFGO60234 142 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 PPM1BO75688 479 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 OR7A10O76100 309 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 MARCH3Q86UD3 253 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 SLC43A2Q8N370 569 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 OR52N1Q8NH53 320 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 IFI44Q8TCB0 444 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 SPRYD4Q8WW59 207 aaPredicted RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 UFD1Q92890 307 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 TBX5Q99593 518 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 BARHL1Q9BZE3 327 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 SLC19A3Q9BZV2 496 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 ISG20L2Q9H9L3 353 aaKnown RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 QPCTLQ9NXS2 382 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 NCOR1O75376 2440 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 SLC22A31A6NKX4 558 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 OR6C76A6NM76 312 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 YKT6O15498 198 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 SULT1C4O75897 302 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 PNMTP11086 282 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 HIST1H1CP16403 213 aaKnown RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 SOX6P35712 828 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 SLC16A1P53985 500 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 RPS7P62081 194 aaKnown RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 RPS4XP62701 263 aaKnown RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 C22orf42Q6IC83 251 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 ZNF322Q6U7Q0 402 aaPredicted RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 PRR23CQ6ZRP0 262 aa15.94■□□□□ 0.14
SMC6-206ENST00000446852 ZC3H10Q96K80 434 aaKnown RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 NECAB3Q96P71 396 aaPredicted RBP15.94■□□□□ 0.14
SMC6-206ENST00000446852 LAT2Q9GZY6 243 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms