RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CDRT4Q8N9R6 151 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 OR6F1Q8NGZ6 308 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 SEMA4GQ9NTN9 838 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 TRDV1A0A1B0GX56 115 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 HBE1P02100 147 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 UNQ6126/PRO20091Q6UXV3 157 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 LGALS14Q8TCE9 139 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 TM9SF4Q92544 642 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 C14orf79Q96F83 325 aa17.43■□□□□ 0.38
SHANK3-203ENST00000445220 ARAFP10398 606 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 ILKQ13418 452 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 RTL6Q6ICC9 239 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 TCEAL8Q8IYN2 117 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 TEX19Q8NA77 164 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 ST8SIA2Q92186 375 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 SLCO3A1Q9UIG8 710 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 SLC9B1P1A6NJY1 282 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 CBR1P16152 277 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 TM4SF4P48230 202 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 ZNF681Q96N22 645 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 KCNIP1Q9NZI2 227 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 SURF4O15260 269 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 CLEC2LP0C7M8 214 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 PNMTP11086 282 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 CCR6P51684 374 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 CCR9P51686 369 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 TAS2R30P59541 319 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 SLC9A3R2Q15599 337 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 ZBTB44Q8NCP5 570 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 LINC01599Q8WXQ3 324 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 C12orf57Q99622 126 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 USP36Q9P275 1121 aaKnown RBP17.42■□□□□ 0.38
SHANK3-203ENST00000445220 KLHL13Q9P2N7 655 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 TRABD2BA6NFA1 517 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 MROH6A6NGR9 719 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 HMGN2P05204 90 aaKnown RBP17.42■□□□□ 0.38
SHANK3-203ENST00000445220 ACY1Q03154 408 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 SCD5Q86SK9 330 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 LRRTM3Q86VH5 581 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 EGLN2Q96KS0 407 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 SGIP1Q9BQI5 828 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 NRIP3Q9NQ35 241 aa17.42■□□□□ 0.38
SHANK3-203ENST00000445220 TRBV4-1A0A0J9YWV2 114 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 CD300LBA8K4G0 201 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 KLF8O95600 359 aaPredicted RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 TYRP1P17643 537 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 SHC1P29353 583 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 RPS19P39019 145 aaKnown RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 SNU13P55769 128 aaKnown RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 DOK4Q8TEW6 326 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 TRMT2BQ96GJ1 504 aaKnown RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ARNT2Q9HBZ2 717 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 C4BP0C0L5 1744 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 BHLHE40O14503 412 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 GYPBP06028 91 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 CTSAP10619 480 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ISL1P61371 349 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 SLC14A2Q15849 920 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ACTBL2Q562R1 376 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 GPR155Q7Z3F1 870 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 PELI3Q8N2H9 469 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 OR10R2Q8NGX6 335 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 BORCS7Q96B45 105 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 PURGQ9UJV8 347 aaKnown RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 MAGEB4O15481 346 aaPredicted RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ITGB2P05107 769 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 APCDD1Q8J025 514 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ZNF611Q8N823 705 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 OR5D14Q8NGL3 314 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ZNF582Q96NG8 517 aaPredicted RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 ATP13A2Q9NQ11 1180 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 HEPACAM2A8MVW5 462 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 TRAPPC6AO75865 159 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 RAC2P15153 192 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 SPI1P17947 270 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 EN2P19622 333 aaPredicted RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 MC3RP41968 323 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 GP2P55259 537 aaKnown RBP17.41■□□□□ 0.38
SHANK3-203ENST00000445220 SLC35A2P78381 396 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 TNK1Q13470 666 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 UBXN10Q96LJ8 280 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 DDOQ99489 341 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 KPTNQ9Y664 436 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 NUP98P52948 1817 aa17.41■□□□□ 0.38
SHANK3-203ENST00000445220 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 A0A1W2PP55 124 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 VSTM2BA6NLU5 285 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 NUDT19A8MXV4 375 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 D6RAR5 112 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 TNFSF12O43508 249 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 TNFRSF17Q02223 184 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 EBPQ15125 230 aaKnown RBP17.4■□□□□ 0.38
SHANK3-203ENST00000445220 TTLL10Q6ZVT0 673 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 PIANPQ8IYJ0 282 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 DAZLQ92904 295 aaKnown RBP17.4■□□□□ 0.38
SHANK3-203ENST00000445220 ZDHHC12Q96GR4 267 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 NECTIN4Q96NY8 510 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 IL26Q9NPH9 171 aa17.4■□□□□ 0.38
SHANK3-203ENST00000445220 RNGTTO60942 597 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms