RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 VRK1Q99986 396 aaPredicted RBP11.19□□□□□ -0.62
TRIM13-205ENST00000442421 OR11A1Q9GZK7 315 aa11.19□□□□□ -0.62
TRIM13-205ENST00000442421 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
TRIM13-205ENST00000442421 LAT2Q9GZY6 243 aa11.19□□□□□ -0.62
TRIM13-205ENST00000442421 SLC17A5Q9NRA2 495 aa11.19□□□□□ -0.62
TRIM13-205ENST00000442421 CTPS2Q9NRF8 586 aa11.19□□□□□ -0.62
TRIM13-205ENST00000442421 ACER3Q9NUN7 267 aa11.19□□□□□ -0.62
TRIM13-205ENST00000442421 PSMC3IPQ9P2W1 217 aaPredicted RBP11.19□□□□□ -0.62
TRIM13-205ENST00000442421 LOC390937A0A1W2PQ73 354 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 LRP5LA4QPB2 252 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PDLIM1O00151 329 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 RIPK2O43353 540 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 TCF21O43680 179 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PLIN3O60664 434 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 DNAJA2O60884 412 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PMS2P2O95744 297 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 ZNF23P17027 643 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PGCP20142 388 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 SLC16A1P53985 500 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 SNRPD2P62316 118 aaKnown RBP11.18□□□□□ -0.62
TRIM13-205ENST00000442421 SLC46A3Q7Z3Q1 461 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 MEX3DQ86XN8 651 aaKnown RBP11.18□□□□□ -0.62
TRIM13-205ENST00000442421 DDIASQ8IXT1 998 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 RFLNBQ8N5W9 214 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
TRIM13-205ENST00000442421 CCDC63Q8NA47 563 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PSMA8Q8TAA3 256 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PIGXQ8TBF5 258 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 OR5P2Q8WZ92 322 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 SERHL2Q9H4I8 314 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 SLC7A10Q9NS82 523 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 OXSMQ9NWU1 459 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 UPB1Q9UBR1 384 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 MKLN1Q9UL63 735 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 AMDHD2Q9Y303 409 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 TMED5Q9Y3A6 229 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 DNAJC15Q9Y5T4 150 aa11.18□□□□□ -0.62
TRIM13-205ENST00000442421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRIM13-205ENST00000442421 TMEM233B4DJY2 109 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CFLARO15519 480 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 FCMRO60667 390 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 BCAS1O75363 584 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-205ENST00000442421 UGT2B17O75795 530 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CHEK2O96017 543 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CPA3P15088 417 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 DDX5P17844 614 aaKnown RBP11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CCNA2P20248 432 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 SOAT1P35610 550 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 OR2B6P58173 313 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 PTGR1Q14914 329 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 ZNF141Q15928 474 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CCDC153Q494R4 210 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 TSPO2Q5TGU0 170 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 KANK2Q63ZY3 851 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 RNF165Q6ZSG1 346 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CLEC4FQ8N1N0 589 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 C17orf78Q8N4C9 275 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 C1orf162Q8NEQ5 155 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-205ENST00000442421 SFXN5Q8TD22 340 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CCDC106Q9BWC9 280 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 CHRNA9Q9UGM1 479 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 DCTN4Q9UJW0 460 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 SPIN1Q9Y657 262 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-205ENST00000442421 MEGF8Q7Z7M0 2845 aa11.17□□□□□ -0.62
TRIM13-205ENST00000442421 TMEM114B3SHH9 223 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 KLF11O14901 512 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 PIP5K1BO14986 540 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 STX11O75558 287 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 URI1O94763 535 aaPredicted RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 CFPP27918 469 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 IL2RGP31785 369 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 RYKP34925 604 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 RPL3P39023 403 aaKnown RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 APOBEC1P41238 236 aaKnown RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 MAGEA8P43361 318 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 PRPS1P60891 318 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 MAPK14Q16539 360 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 LSM12Q3MHD2 195 aaKnown RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 HIKESHIQ53FT3 197 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 TRMT10CQ7L0Y3 403 aaKnown RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 EIF3MQ7L2H7 374 aaKnown RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 SPATA19Q7Z5L4 167 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 C10orf107Q8IVU9 208 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 KRTCAP2Q8N6L1 136 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 ZNF563Q8TA94 476 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 TWIST2Q8WVJ9 160 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 GATA5Q9BWX5 397 aaPredicted RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 MYOZ1Q9NP98 299 aaPredicted RBP11.16□□□□□ -0.62
TRIM13-205ENST00000442421 ATAD3AQ9NVI7 634 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 HDGFL3Q9Y3E1 203 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 FLVCR1Q9Y5Y0 555 aa11.16□□□□□ -0.62
TRIM13-205ENST00000442421 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.62
TRIM13-205ENST00000442421 DNPH1O43598 174 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms