RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PPA1Q15181 289 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 SYPL1Q16563 259 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 ATG16L1Q676U5 607 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 ADAM5Q6NVV9 412 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 CMIPQ8IY22 773 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 ANKFN1Q8N957 763 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 GLB1L3Q8NCI6 653 aaPredicted RBP16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 PIGXQ8TBF5 258 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 PNPT1Q8TCS8 783 aaKnown RBP16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 WDR60Q8WVS4 1066 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 ZG16BQ96DA0 208 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 DNAJA3Q96EY1 480 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 INPP5KQ9BT40 448 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 WDR55Q9H6Y2 383 aaPredicted RBP16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 NKIRAS1Q9NYS0 192 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 NOSIPQ9Y314 301 aaKnown RBP16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 FREM1Q5H8C1 2179 aa16.34■□□□□ 0.21
AC004540.1-201ENST00000439120 CLDN24A6NM45 220 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 SLCO1B7G3V0H7 640 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 RFXANKO14593 260 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 GPR171O14626 319 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 KRT75O95678 551 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 GSNP06396 782 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 PAX1P15863 534 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 IL7RP16871 459 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 GGT1P19440 569 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 CLK1P49759 484 aaKnown RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 OR2B6P58173 313 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 BSPH1Q075Z2 132 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 PDK3Q15120 406 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 AP1ARQ63HQ0 302 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 ABLIM2Q6H8Q1 611 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 SSX8Q7RTT4 187 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 PIWIL2Q8TC59 973 aaKnown RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 IGFBPL1Q8WX77 278 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 CNOT9Q92600 299 aaKnown RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF75CPQ92670 426 aaPredicted RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 GTPBP3Q969Y2 492 aaKnown RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 APH1AQ96BI3 265 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 DDIT4LQ96D03 193 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 TRMT61AQ96FX7 289 aaKnown RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 OR11A1Q9GZK7 315 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 MTHFD2LQ9H903 347 aaPredicted RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF701Q9NV72 531 aaPredicted RBP16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 GPR45Q9Y5Y3 372 aa16.33■□□□□ 0.2
AC004540.1-201ENST00000439120 IGKV3D-15A0A087WSY6 115 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 A0A1W2PP18 115 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 PRAMEF27A3QJZ7 478 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 AGAP5A6NIR3 686 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 DNPH1O43598 174 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 ANP32DO95626 131 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 IGHV3-9P01782 118 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 CHRM4P08173 479 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 IDO1P14902 403 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 IGHV1-2P23083 117 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 IL12AP29459 219 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 CDKN2CP42773 168 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 MAGEA8P43361 318 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 POLR2HP52434 150 aaKnown RBP16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF672Q499Z4 452 aaPredicted RBP16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 TIMM23BQ5SRD1 257 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 DNAJC14Q6Y2X3 702 aaPredicted RBP16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 LRRC74BQ6ZQY2 392 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 P2RY8Q86VZ1 359 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 KBTBD8Q8NFY9 601 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 SMAP2Q8WU79 429 aaPredicted RBP16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 ARL5BQ96KC2 179 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC38A1Q9H2H9 487 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 TMEM181Q9P2C4 612 aa16.32■□□□□ 0.2
AC004540.1-201ENST00000439120 TMED7-TICAM2A0A0A6YYA0 188 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 CIB4A0PJX0 185 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 CCT8L1PA6NM43 557 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 AP3D1O14617 1153 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 MRPL33O75394 65 aaKnown RBP16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC22A3O75751 556 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 C1QCP02747 245 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 IL6P05231 212 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 DBIP07108 87 aaKnown RBP16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 COX5AP20674 150 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 EDNRAP25101 427 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 WDR4P57081 412 aaKnown RBP16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 FBXW9Q5XUX1 488 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 ADGRG3Q86Y34 549 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 PEX5LQ8IYB4 626 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 PMM1Q92871 262 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 NAA11Q9BSU3 229 aaPredicted RBP16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 ALG2Q9H553 416 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 CACYBPQ9HB71 228 aaKnown RBP16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 P2RX2Q9UBL9 471 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 TMED7Q9Y3B3 224 aa16.31■□□□□ 0.2
AC004540.1-201ENST00000439120 ROS1P08922 2347 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 CFAP73A6NFT4 308 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 EIF1BO60739 113 aaKnown RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 RAD51DO75771 328 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 TACR3P29371 465 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 MAGOHP61326 146 aaKnown RBP16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 SLC35A1P78382 337 aa16.3■□□□□ 0.2
AC004540.1-201ENST00000439120 FAPQ12884 760 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms