RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MEPEQ9NQ76 525 aaPredicted RBP20.86■□□□□ 0.93
CPSF4-204ENST00000436336 POFUT2Q9Y2G5 429 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 TMED7Q9Y3B3 224 aa20.86■□□□□ 0.93
CPSF4-204ENST00000436336 DLGAP1O14490 977 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 POU2F1P14859 743 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 PTNP21246 168 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 ADH6P28332 368 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 HSPA13P48723 471 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 CTBP2P56545 445 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 ADGRG3Q86Y34 549 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 PFN4Q8NHR9 129 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 GTPBP3Q969Y2 492 aaKnown RBP20.85■□□□□ 0.93
CPSF4-204ENST00000436336 PAPOLBQ9NRJ5 636 aaKnown RBP20.85■□□□□ 0.93
CPSF4-204ENST00000436336 DKKL1Q9UK85 242 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 TMEM5Q9Y2B1 443 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 PCDHGB7Q9Y5F8 929 aa20.85■□□□□ 0.93
CPSF4-204ENST00000436336 MKRN2OSH3BPM6 223 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 KPNA4O00629 521 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-204ENST00000436336 IFI30P13284 250 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 CDH2P19022 906 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-204ENST00000436336 HK1P19367 917 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 SRD5A2P31213 254 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 IL1RL1Q01638 556 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 POMZP3Q6PJE2 187 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 CDK20Q8IZL9 346 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 ZADH2Q8N4Q0 377 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 POC1BQ8TC44 478 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 FAM46AQ96IP4 442 aaKnown RBP20.84■□□□□ 0.93
CPSF4-204ENST00000436336 NPAS1Q99742 590 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 UBQLN3Q9H347 655 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 CSAG2Q9Y5P2 127 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 IGKV1D-42A0A075B6H8 117 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 TRAV17A0A0B4J275 112 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 HTR3EA5X5Y0 456 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 TMEM8BA6NDV4 472 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 MITFO75030 526 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-204ENST00000436336 WISP1O95388 367 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 SNAP29O95721 258 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 IGF2P01344 180 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 GSTM3P21266 225 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 MEOX1P50221 254 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 MAP2K6P52564 334 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 COX10Q12887 443 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 TBR1Q16650 682 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 GLYR1Q49A26 553 aaPredicted RBP20.84■□□□□ 0.93
CPSF4-204ENST00000436336 CD300LDQ6UXZ3 194 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 BPIFA2Q96DR5 249 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 UCK2Q9BZX2 261 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 C20orf141Q9NUB4 165 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 B4GALT7Q9UBV7 327 aa20.84■□□□□ 0.93
CPSF4-204ENST00000436336 MRPS18CQ9Y3D5 142 aaKnown RBP20.84■□□□□ 0.93
CPSF4-204ENST00000436336 SUSD5O60279 629 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 GSSP48637 474 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 CXADRP78310 365 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 CRYZQ08257 329 aaKnown RBP20.83■□□□□ 0.92
CPSF4-204ENST00000436336 TSPAN31Q12999 210 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 NHSL2Q5HYW2 709 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 KLHL17Q6TDP4 642 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 TMPRSS11FQ6ZWK6 438 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 GALNT5Q7Z7M9 940 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 PARP8Q8N3A8 854 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 CHRNA9Q9UGM1 479 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 ENOPH1Q9UHY7 261 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 NCOR2Q9Y618 2525 aa20.83■□□□□ 0.92
CPSF4-204ENST00000436336 LOC400499M0QZD8 3231 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 TMEM72A0PK05 275 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 KLF4O43474 513 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 RFPL3SP0C7P2 107 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 CCNA2P20248 432 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 FPR3P25089 353 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 EGR4Q05215 589 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 C5orf46Q6UWT4 87 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 LSRQ86X29 649 aaPredicted RBP20.82■□□□□ 0.92
CPSF4-204ENST00000436336 P3H2Q8IVL5 708 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 GTPBP8Q8N3Z3 284 aaPredicted RBP20.82■□□□□ 0.92
CPSF4-204ENST00000436336 GPA33Q99795 319 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 TTTY12Q9BZ98 90 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 TOR3AQ9H497 397 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 DMXL2Q8TDJ6 3036 aa20.82■□□□□ 0.92
CPSF4-204ENST00000436336 CFAP47Q6ZTR5 3102 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ENO4A6NNW6 628 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 A8MVM7 634 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 SHISA8B8ZZ34 492 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF208O43345 1280 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZIC3O60481 467 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ITGB2P05107 769 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF17P17021 662 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 GDF1P27539 372 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 GPR4P46093 362 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ALDH6A1Q02252 535 aaKnown RBP20.81■□□□□ 0.92
CPSF4-204ENST00000436336 TOMM20Q15388 145 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 HYAL4Q2M3T9 481 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZIK1Q3SY52 487 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZFP62Q8NB50 900 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-204ENST00000436336 STK35Q8TDR2 534 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF703Q9H7S9 590 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-204ENST00000436336 SERINC1Q9NRX5 453 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 CD97P48960 835 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 TMEM44Q2T9K0 475 aa20.81■□□□□ 0.92
CPSF4-204ENST00000436336 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms