RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 MTHFD2LQ9H903 347 aaPredicted RBP13.43□□□□□ -0.26
HERC3-206ENST00000431413 CTPS2Q9NRF8 586 aa13.43□□□□□ -0.26
HERC3-206ENST00000431413 PRSS50Q9UI38 385 aa13.43□□□□□ -0.26
HERC3-206ENST00000431413 NOSIPQ9Y314 301 aaKnown RBP13.43□□□□□ -0.26
HERC3-206ENST00000431413 IGKV3D-15A0A087WSY6 115 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 TRIM64A6NGJ6 449 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 TRIM64BA6NI03 449 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 SDHDO14521 159 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 ZNF500O60304 480 aaPredicted RBP13.42□□□□□ -0.26
HERC3-206ENST00000431413 KRT75O95678 551 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 ALDOCP09972 364 aaKnown RBP13.42□□□□□ -0.26
HERC3-206ENST00000431413 IL7RP16871 459 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 IDH2P48735 452 aaKnown RBP13.42□□□□□ -0.26
HERC3-206ENST00000431413 FUT5Q11128 374 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 ETFDHQ16134 617 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 TIMM23BQ5SRD1 257 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 FBXW9Q5XUX1 488 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 LRRC74BQ6ZQY2 392 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 CIARTQ8N365 385 aaPredicted RBP13.42□□□□□ -0.26
HERC3-206ENST00000431413 SMAP2Q8WU79 429 aaPredicted RBP13.42□□□□□ -0.26
HERC3-206ENST00000431413 APH1AQ96BI3 265 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 DDIT4LQ96D03 193 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 ZG16BQ96DA0 208 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 FAIMQ9NVQ4 179 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 PRDM4Q9UKN5 801 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 ABCA2Q9BZC7 2435 aa13.42□□□□□ -0.26
HERC3-206ENST00000431413 RAI1Q7Z5J4 1906 aaPredicted RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 A0A1W2PP18 115 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 CIB4A0PJX0 185 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 TMEM120BA0PK00 339 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 AGAP5A6NIR3 686 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 EIF1BO60739 113 aaKnown RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 MRPL33O75394 65 aaKnown RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 IL6P05231 212 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 NR2F1P10589 423 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 IDO1P14902 403 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 COX5AP20674 150 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 EPHA3P29320 983 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 MAGEA8P43361 318 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 POLR2HP52434 150 aaKnown RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 BSPH1Q075Z2 132 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 SYPL1Q16563 259 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 ZNF672Q499Z4 452 aaPredicted RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 NXNQ6DKJ4 435 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 ADGRG3Q86Y34 549 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 ANKFN1Q8N957 763 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 WDR60Q8WVS4 1066 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 RADILQ96JH8 1075 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 ARL5BQ96KC2 179 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 TEX37Q96LM6 180 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 NAA11Q9BSU3 229 aaPredicted RBP13.41□□□□□ -0.26
HERC3-206ENST00000431413 ALG2Q9H553 416 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 PARPBPQ9NWS1 579 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 NKIRAS1Q9NYS0 192 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 TMEM181Q9P2C4 612 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 GPR45Q9Y5Y3 372 aa13.41□□□□□ -0.26
HERC3-206ENST00000431413 HEATR5AQ86XA9 2040 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 GOLGA8QA0A0J9YX86 632 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 GOLGA8OA6NCC3 632 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 CFAP73A6NFT4 308 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 CCT8L1PA6NM43 557 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 GOLGA8NF8WBI6 632 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 RFXANKO14593 260 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 ZNF208O43345 1280 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 SLC22A3O75751 556 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 ANP32DO95626 131 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 DBIP07108 87 aaKnown RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 KITP10721 976 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 CCNA2P20248 432 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 IGHV1-2P23083 117 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 IDUAP35475 653 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 SLC1A3P43003 542 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 SLC18A1P54219 525 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 OR2B6P58173 313 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 SLC35A1P78382 337 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 PPP2R2BQ00005 443 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 DNAJC14Q6Y2X3 702 aaPredicted RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 HMGN2P46Q86SG4 172 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 PEX5LQ8IYB4 626 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 ZNF440Q8IYI8 595 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 LILRB1Q8NHL6 650 aaPredicted RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 CNOT9Q92600 299 aaKnown RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 INPP5KQ9BT40 448 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 SLC38A1Q9H2H9 487 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 WDR55Q9H6Y2 383 aaPredicted RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 RMND5AQ9H871 391 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 CACYBPQ9HB71 228 aaKnown RBP13.4□□□□□ -0.26
HERC3-206ENST00000431413 ASB6Q9NWX5 421 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 CALML5Q9NZT1 146 aa13.4□□□□□ -0.26
HERC3-206ENST00000431413 NSD1Q96L73 2696 aaPredicted RBP13.39□□□□□ -0.27
HERC3-206ENST00000431413 TMED7-TICAM2A0A0A6YYA0 188 aa13.39□□□□□ -0.27
HERC3-206ENST00000431413 PRAMEF27A3QJZ7 478 aa13.39□□□□□ -0.27
HERC3-206ENST00000431413 TMEM247A6NEH6 219 aa13.39□□□□□ -0.27
HERC3-206ENST00000431413 DPRXA6NFQ7 191 aa13.39□□□□□ -0.27
HERC3-206ENST00000431413 OR5H1A6NKK0 313 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms