RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SMAP2Q8WU79 429 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-209ENST00000428728 CCDC115Q96NT0 180 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 SAP130Q9H0E3 1048 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-209ENST00000428728 NPAP1Q9NZP6 1156 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 EMC3Q9P0I2 261 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 HAO1Q9UJM8 370 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 CSPG4Q6UVK1 2322 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 CCDC154A6NI56 674 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 SDHDO14521 159 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 RAMP1O60894 148 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 ADAM11O75078 769 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 RAD51DO75771 328 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 GUSBP08236 651 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 DANCRP0C864 163 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 GGT1P19440 569 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 IDH2P48735 452 aaKnown RBP15.09■□□□□ 0.01
TRIM39-209ENST00000428728 KCNJ10P78508 379 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 PPP2R2BQ00005 443 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 SYPL1Q16563 259 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 CLEC12BQ2HXU8 276 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 HHATQ5VTY9 493 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 OGFOD2Q6N063 350 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 MTDHQ86UE4 582 aaKnown RBP15.09■□□□□ 0.01
TRIM39-209ENST00000428728 ANKFN1Q8N957 763 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 MAPK1IP1LQ8NDC0 245 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 OIT3Q8WWZ8 545 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 CNOT9Q92600 299 aaKnown RBP15.09■□□□□ 0.01
TRIM39-209ENST00000428728 MUCL1Q96DR8 90 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 TRMT61AQ96FX7 289 aaKnown RBP15.09■□□□□ 0.01
TRIM39-209ENST00000428728 PANX1Q96RD7 426 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 USB1Q9BQ65 265 aaKnown RBP15.09■□□□□ 0.01
TRIM39-209ENST00000428728 INPP5KQ9BT40 448 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 TRIM2Q9C040 744 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 AIG1Q9NVV5 245 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 BTNL2Q9UIR0 455 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 LIPT1Q9Y234 373 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 NOSIPQ9Y314 301 aaKnown RBP15.09■□□□□ 0.01
TRIM39-209ENST00000428728 HIVEP2P31629 2446 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 ABCA2Q9BZC7 2435 aa15.09■□□□□ 0.01
TRIM39-209ENST00000428728 IGKV3D-15A0A087WSY6 115 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 GOLGA8QA0A0J9YX86 632 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 GOLGA8OA6NCC3 632 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 ZNF716A6NP11 495 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 GOLGA8NF8WBI6 632 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 OVOL3O00110 214 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 PMS2P2O95744 297 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 GSNP06396 782 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 CHRM4P08173 479 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 IL12AP29459 219 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 CDKN2CP42773 168 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 CDH11P55287 796 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 OR2B6P58173 313 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 TIMM23BQ5SRD1 257 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 DNAJC14Q6Y2X3 702 aaPredicted RBP15.08■□□□□ 0
TRIM39-209ENST00000428728 LRRC34Q8IZ02 419 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 TRIML2Q8N7C3 387 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 ZNF433Q8N7K0 673 aaPredicted RBP15.08■□□□□ 0
TRIM39-209ENST00000428728 PIGXQ8TBF5 258 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 WDR60Q8WVS4 1066 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 APH1AQ96BI3 265 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 OR52E6Q96RD3 313 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 SLC38A1Q9H2H9 487 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 EXOSC3Q9NQT5 275 aaKnown RBP15.08■□□□□ 0
TRIM39-209ENST00000428728 HDGFL3Q9Y3E1 203 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 PLCE1Q9P212 2302 aa15.08■□□□□ 0
TRIM39-209ENST00000428728 TMED7-TICAM2A0A0A6YYA0 188 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 CIB4A0PJX0 185 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 OR5H1A6NKK0 313 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 CCT8L1PA6NM43 557 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 RNF223E7ERA6 249 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 ABCD4O14678 606 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 PGRP06401 933 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 EPHA3P29320 983 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 PGGHGQ32M88 737 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 TNFAIP8L3Q5GJ75 292 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 COX20Q5RI15 118 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 ZNF621Q6ZSS3 439 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 ADGRG3Q86Y34 549 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 CCDC103Q8IW40 242 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 OR52N5Q8NH56 324 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 MGARPQ8TDB4 240 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 TRNT1Q96Q11 434 aaKnown RBP15.07■□□□□ 0
TRIM39-209ENST00000428728 ALG2Q9H553 416 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 WDR55Q9H6Y2 383 aaPredicted RBP15.07■□□□□ 0
TRIM39-209ENST00000428728 TMED7Q9Y3B3 224 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 ZANQ9Y493 2812 aa15.07■□□□□ 0
TRIM39-209ENST00000428728 A0A1W2PR80 420 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 SHISA9B4DS77 424 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 NDUFS7O75251 213 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 NR2F1P10589 423 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 KITP10721 976 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 PTNP21246 168 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 ACVR1BP36896 505 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 ANXA11P50995 505 aaKnown RBP15.06■□□□□ 0
TRIM39-209ENST00000428728 ZNF83P51522 516 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 SPOCK1Q08629 439 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 PDK3Q15120 406 aa15.06■□□□□ 0
TRIM39-209ENST00000428728 MRPL2Q5T653 305 aaKnown RBP15.06■□□□□ 0
TRIM39-209ENST00000428728 FBXW9Q5XUX1 488 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms