RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 KCNJ10P78508 379 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 FAPQ12884 760 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 PPA1Q15181 289 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 MAPK11Q15759 364 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 SYPL1Q16563 259 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 CLEC12BQ2HXU8 276 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 ANXA8L1Q5VT79 327 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 DNAJC14Q6Y2X3 702 aaPredicted RBP13.69□□□□□ -0.22
SEC13-210ENST00000428626 DNM1P46Q6ZS02 220 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 GALNT5Q7Z7M9 940 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 RNF130Q86XS8 419 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 CCDC103Q8IW40 242 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 INPP5KQ9BT40 448 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 SLC38A1Q9H2H9 487 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 MEAF6Q9HAF1 191 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 SSU72Q9NP77 194 aaKnown RBP13.69□□□□□ -0.22
SEC13-210ENST00000428626 NGBQ9NPG2 151 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 SERINC1Q9NRX5 453 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 MARCOQ9UEW3 520 aaPredicted RBP13.69□□□□□ -0.22
SEC13-210ENST00000428626 CHRNA9Q9UGM1 479 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 GDF2Q9UK05 429 aaPredicted RBP13.69□□□□□ -0.22
SEC13-210ENST00000428626 PCDHGB4Q9UN71 923 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 SLC35A3Q9Y2D2 325 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 RTTNQ86VV8 2226 aa13.69□□□□□ -0.22
SEC13-210ENST00000428626 GOLGA8QA0A0J9YX86 632 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 GOLGA8OA6NCC3 632 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 E9PBE3 544 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 GOLGA8NF8WBI6 632 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 SDHDO14521 159 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 CCNA2P20248 432 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 APOBEC1P41238 236 aaKnown RBP13.68□□□□□ -0.22
SEC13-210ENST00000428626 KHKP50053 298 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 SPOCK1Q08629 439 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 BST1Q10588 318 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 VEZF1Q14119 521 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 PDK3Q15120 406 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 COX20Q5RI15 118 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 TIMM23BQ5SRD1 257 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 OGFOD2Q6N063 350 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 GRINAQ7Z429 371 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 ZNF100Q8IYN0 542 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 ZNF563Q8TA94 476 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 SLC25A43Q8WUT9 341 aaPredicted RBP13.68□□□□□ -0.22
SEC13-210ENST00000428626 TRAF4Q9BUZ4 470 aaPredicted RBP13.68□□□□□ -0.22
SEC13-210ENST00000428626 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 SLCO5A1Q9H2Y9 848 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 CISD1Q9NZ45 108 aaKnown RBP13.68□□□□□ -0.22
SEC13-210ENST00000428626 BTNL2Q9UIR0 455 aa13.68□□□□□ -0.22
SEC13-210ENST00000428626 CUBNO60494 3623 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 A0A1W2PP18 115 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 A0A1W2PR80 420 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 OR5H1A6NKK0 313 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 ABCD4O14678 606 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 TM9SF1O15321 606 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 RAD51DO75771 328 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 PMS2P2O95744 297 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 AGR2O95994 175 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 GSNP06396 782 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 IMPDH2P12268 514 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 GGT1P19440 569 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 S100A3P33764 101 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 IDH2P48735 452 aaKnown RBP13.67□□□□□ -0.22
SEC13-210ENST00000428626 CSNK2A1P68400 391 aaPredicted RBP13.67□□□□□ -0.22
SEC13-210ENST00000428626 H3F3AP84243 136 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 STX3Q13277 289 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 GPAT3Q53EU6 434 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 FBXW9Q5XUX1 488 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 DTX2Q86UW9 622 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 OIT3Q8WWZ8 545 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 ARL8AQ96BM9 186 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
SEC13-210ENST00000428626 EXOSC3Q9NQT5 275 aaKnown RBP13.67□□□□□ -0.22
SEC13-210ENST00000428626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.67□□□□□ -0.22
SEC13-210ENST00000428626 SLC6A13Q9NSD5 602 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 AIG1Q9NVV5 245 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 OSGIN1Q9UJX0 560 aa13.67□□□□□ -0.22
SEC13-210ENST00000428626 CHD3Q12873 2000 aaKnown RBP13.67□□□□□ -0.22
SEC13-210ENST00000428626 TMEM72A0PK05 275 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 ZC3H12DA2A288 527 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 CCDC154A6NI56 674 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 AGAP5A6NIR3 686 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 PDLIM1O00151 329 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 ITGA5P08648 1049 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 RPS4Y1P22090 263 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 CHI3L1P36222 383 aaPredicted RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 SLC16A1P53985 500 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 CLNS1AP54105 237 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
SEC13-210ENST00000428626 DPY19L1Q2PZI1 675 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 CEP85LQ5SZL2 805 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 B3GLCTQ6Y288 498 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 LRRC34Q8IZ02 419 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 ARFGAP2Q8N6H7 521 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 VPS37AQ8NEZ2 397 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 OR52E4Q8NGH9 312 aa13.66□□□□□ -0.22
SEC13-210ENST00000428626 OR52N5Q8NH56 324 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms