RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CD8BP10966 210 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 EPXP11678 715 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 PPIBP23284 216 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 AQP1P29972 269 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 MDH1P40925 334 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 DIO1P49895 249 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 RAC3P60763 192 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 IRX1P78414 480 aaPredicted RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 CDK6Q00534 326 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 BNIP2Q12982 314 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 NFYCQ13952 458 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 SCARB2Q14108 478 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 TMPPEQ6ZT21 453 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 SERPINA11Q86U17 422 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 COMTD1Q86VU5 262 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 BBS10Q8TAM1 723 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 PMM1Q92871 262 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 WFIKKN1Q96NZ8 548 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 ZNF300Q96RE9 604 aaPredicted RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 CGREF1Q99674 301 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 SPATA9Q9BWV2 254 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 POLDIP3Q9BY77 421 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 LIME1Q9H400 295 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 SLC24A3Q9HC58 644 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 PLSCR4Q9NRQ2 329 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 TMEM45AQ9NWC5 275 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 THUMPD1Q9NXG2 353 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 KLHL28Q9NXS3 571 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 ING1Q9UK53 422 aaPredicted RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 ZNF232Q9UNY5 417 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 HEATR1Q9H583 2144 aaKnown RBP13.25□□□□□ -0.29
RTN4-210ENST00000427710 DSCAMO60469 2012 aa13.25□□□□□ -0.29
RTN4-210ENST00000427710 PRKD3O94806 890 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 THBS1P07996 1170 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 GPX2P18283 190 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 UGT2B10P36537 528 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 PEX19P40855 299 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 POLR2HP52434 150 aaKnown RBP13.24□□□□□ -0.29
RTN4-210ENST00000427710 OR2B6P58173 313 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 RASGEF1BQ0VAM2 473 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 KLF10Q13118 480 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 ADRM1Q16186 407 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 GLIPR1L2Q4G1C9 344 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 TMEM201Q5SNT2 666 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 GTF2IRD2BQ6EKJ0 949 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 C22orf34Q6ZV56 151 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 CDH24Q86UP0 819 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 GTF2IRD2Q86UP8 949 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 DPP10Q8N608 796 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 SLC39A3Q9BRY0 314 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 PIF1Q9H611 641 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
RTN4-210ENST00000427710 BCL2L10Q9HD36 194 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 GLRX2Q9NS18 164 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 RASSF1Q9NS23 344 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 KLHL13Q9P2N7 655 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 IFT52Q9Y366 437 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 SPIN1Q9Y657 262 aaPredicted RBP13.24□□□□□ -0.29
RTN4-210ENST00000427710 MED13LQ71F56 2210 aa13.24□□□□□ -0.29
RTN4-210ENST00000427710 ZNF814B7Z6K7 855 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 TPST1O60507 370 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 RAMP1O60894 148 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 IMPDH2P12268 514 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 EDNRAP25101 427 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 SLC1A3P43003 542 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 DAZAP2Q15038 168 aaPredicted RBP13.23□□□□□ -0.29
RTN4-210ENST00000427710 RNPS1Q15287 305 aaKnown RBP13.23□□□□□ -0.29
RTN4-210ENST00000427710 TSC22D1Q15714 1073 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 PRAMEF8Q5VWM4 474 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 PRAMEF7Q5VXH5 474 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 FBXW10Q5XX13 1052 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 REEP3Q6NUK4 255 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 PTOV1Q86YD1 416 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 CCDC103Q8IW40 242 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 SLC25A43Q8WUT9 341 aaPredicted RBP13.23□□□□□ -0.29
RTN4-210ENST00000427710 C10orf82Q8WW14 230 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 ZNF317Q96PQ6 595 aaPredicted RBP13.23□□□□□ -0.29
RTN4-210ENST00000427710 PSD2Q9BQI7 771 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 ADAM19Q9H013 955 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
RTN4-210ENST00000427710 ELOVL5Q9NYP7 299 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 C6orf203Q9P0P8 240 aaPredicted RBP13.23□□□□□ -0.29
RTN4-210ENST00000427710 TESMINQ9Y4I5 508 aa13.23□□□□□ -0.29
RTN4-210ENST00000427710 ARID1AO14497 2285 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 FAM221AA4D161 298 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 C16orf97H3BN30 126 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 FAAHO00519 579 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 SIAH2O43255 324 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 CYTIPO60759 359 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 YES1P07947 543 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 UQCRBP14927 111 aa13.22□□□□□ -0.29
RTN4-210ENST00000427710 SLC6A2P23975 617 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms