RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 BEST3Q8N1M1 668 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FAM71E2Q8N5Q1 922 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TRAM1L1Q8N609 369 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR13C5Q8NGS8 318 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR14C36Q8NHC7 312 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SLC25A43Q8WUT9 341 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 FAM46AQ96IP4 442 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF385AQ96PM9 386 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ALKBH3Q96Q83 286 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 NDUFAF3Q9BU61 184 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 POLR1EQ9GZS1 481 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 RHOFQ9HBH0 211 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 MSL2Q9HCI7 577 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZIM2Q9NZV7 527 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SHROOM3Q8TF72 1996 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 LMO7Q8WWI1 1683 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 C5P01031 1676 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 USP54Q70EL1 1684 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF320A2RRD8 509 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 YDJCA8MPS7 323 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ATXN7O15265 892 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 HYAL3O43820 417 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 IFNA17P01571 189 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SFTPBP07988 381 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR12D1P0DN82 309 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 RCC1P18754 421 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TUBG1P23258 451 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TSFMP43897 325 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 NKX6-1P78426 367 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 MLLT11Q13015 90 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 KCNAB1Q14722 419 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TEAD2Q15562 447 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ARHGAP11BQ3KRB8 267 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 PLK5Q496M5 336 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 EEF1DP3Q658K8 133 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR2T2Q6IF00 324 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 MEX3BQ6ZN04 569 aaKnown RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TMEM192Q8IY95 271 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CBARPQ8N350 705 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 C17orf78Q8N4C9 275 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 C11orf42Q8N5U0 333 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 NPWQ8N729 165 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 ZNF433Q8N7K0 673 aaPredicted RBP6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR8J2Q8NGG1 315 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 OR8D1Q8WZ84 308 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 NTAN1Q96AB6 310 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CCDC74AQ96AQ1 378 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SNX22Q96L94 193 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 HSPA12BQ96MM6 686 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SLC6A18Q96N87 628 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 DERL2Q9GZP9 239 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 RGCCQ9H4X1 137 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TRPV4Q9HBA0 871 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 CYSLTR2Q9NS75 346 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 TRPC4Q9UBN4 977 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SLC23A2Q9UGH3 650 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SLC35A3Q9Y2D2 325 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 AMDHD2Q9Y303 409 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 WDR45Q9Y484 360 aa6.37□□□□□ -1.39
CNOT4-205ENST00000423368 SNED1Q8TER0 1413 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 A0A0D9SG52 128 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 TVP23AA6NH52 213 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 IQCF5A8MTL0 148 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 GEMIN2O14893 280 aaKnown RBP6.36□□□□□ -1.39
CNOT4-205ENST00000423368 CHST10O43529 356 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 AK1P00568 194 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 RPLP2P05387 115 aaKnown RBP6.36□□□□□ -1.39
CNOT4-205ENST00000423368 GUSBP08236 651 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 GIPP09681 153 aaPredicted RBP6.36□□□□□ -1.39
CNOT4-205ENST00000423368 GKN3PP0CG01 181 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 THBS2P35442 1172 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 PTH2RP49190 550 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 NOVA1P51513 510 aaKnown RBP6.36□□□□□ -1.39
CNOT4-205ENST00000423368 LBX1P52954 281 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 CRISP1P54107 249 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 SLC10A1Q14973 349 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 SLC9A3R2Q15599 337 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 IFI44LQ53G44 452 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 NKAPLQ5M9Q1 402 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 NPSR1Q6W5P4 371 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 GDPGP1Q6ZNW5 385 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 MOB3CQ70IA8 216 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 KCTD9Q7L273 389 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 SSX7Q7RTT5 188 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 CATSPERDQ86XM0 798 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 WFDC8Q8IUA0 241 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 NAXDQ8IW45 347 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 CMTM1Q8IZ96 169 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 AMER3Q8N944 861 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 RASGEF1AQ8N9B8 481 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 AUTS2Q8WXX7 1259 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 SHDQ96IW2 340 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 NRIP2Q9BQI9 281 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 SELENOIQ9C0D9 397 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 CHST6Q9GZX3 395 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 C1GALT1Q9NS00 363 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 METRNQ9UJH8 293 aa6.36□□□□□ -1.39
CNOT4-205ENST00000423368 LSM2Q9Y333 95 aaKnown RBP6.36□□□□□ -1.39
CNOT4-205ENST00000423368 MIA3Q5JRA6 1907 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms