RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 TMEM129A0AVI4 362 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 KLF7O75840 302 aaPredicted RBP17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 UMODP07911 640 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 RGS6P49758 472 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 PCOLCEQ15113 449 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 ISXQ2M1V0 245 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 CXXC5Q7LFL8 322 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 HEATR5AQ86XA9 2040 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 OR2Y1Q8NGV0 311 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 OR51A7Q8NH64 312 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 ZNF563Q8TA94 476 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 HGDQ93099 445 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 PMEPA1Q969W9 287 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 OR5M11Q96RB7 305 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 MYOTQ9UBF9 498 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 EXOGQ9Y2C4 368 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 EXOSC1Q9Y3B2 195 aaKnown RBP17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 LOXL2Q9Y4K0 774 aa17.21■□□□□ 0.35
RBFOX1-204ENST00000422070 EXPH5Q8NEV8 1989 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 VPS13AQ96RL7 3174 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 MYL12BO14950 172 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SLC2A10O95528 541 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 BCL10O95999 233 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SCG5P05408 212 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 MYL12AP19105 171 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 MLLT10P55197 1068 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SUMO3P55854 103 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 PRPS1P60891 318 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 C1DQ13901 141 aaKnown RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SPCS2Q15005 226 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SPHARQ15513 63 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 MED22Q15528 200 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 CDCP2Q5VXM1 449 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SLC15A4Q8N697 577 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ELP5Q8TE02 316 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 C8orf44Q96CB5 159 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 LIN37Q96GY3 246 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 CDC6Q99741 560 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 DDA1Q9BW61 102 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 TAPBPLQ9BX59 468 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF700Q9H0M5 742 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ZBTB20Q9HC78 741 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 H2AFY2Q9P0M6 372 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 RIIAD1A6NNX1 92 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 CCRL2O00421 344 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 GNB5O14775 395 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 CSO75390 466 aaKnown RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 IGHEP01854 428 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF182P17025 639 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF3P17036 446 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 HK1P19367 917 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 TACR3P29371 465 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 LIMK1P53667 647 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 DLX5P56178 289 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 EXT1Q16394 746 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF74Q16587 644 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF362Q5T0B9 420 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 NIPAL3Q6P499 406 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 DPY19L2P2Q6ZN68 376 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 CPOQ8IVL8 374 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SLC22A8Q8TCC7 542 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 SH3YL1Q96HL8 342 aaPredicted RBP17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 PHOX2BQ99453 314 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 CHRNA9Q9UGM1 479 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 HIF3AQ9Y2N7 669 aa17.2■□□□□ 0.34
RBFOX1-204ENST00000422070 IGHV1-45A0A0A0MS14 117 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 ARPC3O15145 178 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF354AO60765 605 aaPredicted RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 IFNGP01579 166 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 IGHA1P01876 353 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 INSM1Q01101 510 aaPredicted RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 EGR4Q05215 589 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 C17orf67Q0P5P2 114 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 MLLT11Q13015 90 aaPredicted RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 DYNC1I2Q13409 638 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 SF3A2Q15428 464 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 TIMM50Q3ZCQ8 353 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 FAM199XQ6PEV8 388 aaPredicted RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 LYPD8Q6UX82 237 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 LINC00299Q6ZSB3 139 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 B4GALNT2Q8NHY0 566 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 ZNF524Q96C55 264 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 OPALINQ96PE5 141 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 EDEM2Q9BV94 578 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 MMP25Q9NPA2 562 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 ISYNA1Q9NPH2 558 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 TMEM9BQ9NQ34 198 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 CHCHD3Q9NX63 227 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 CLEC2DQ9UHP7 191 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 B3GALT1Q9Y5Z6 326 aa17.19■□□□□ 0.34
RBFOX1-204ENST00000422070 SLC22A31A6NKX4 558 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 WWP2O00308 870 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 SCO2O43819 266 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 IDH3BO43837 385 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 AIREO43918 545 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 PPP1R3DO95685 299 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 FBXO45P0C2W1 286 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 TSPAN19P0C672 248 aa17.18■□□□□ 0.34
RBFOX1-204ENST00000422070 APEHP13798 732 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms