RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 LHX2P50458 406 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 CLNS1AP54105 237 aaKnown RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 DSCR4P56555 118 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 NME5P56597 212 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 B3GALT5-AS1P59052 145 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 POU6F2P78424 691 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TFF3Q07654 80 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 FAM174BQ3ZCQ3 159 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SLC9B1Q4ZJI4 515 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 KHDC1LQ5JSQ8 128 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 DCST2Q5T1A1 773 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 RAET1LQ5VY80 246 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 NSUN5P2Q63ZY6 315 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 AAGABQ6PD74 315 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 BHLHB9Q6PI77 547 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ENPP6Q6UWR7 440 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SPATA19Q7Z5L4 167 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ANKRD46Q86W74 232 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 LACC1Q8IV20 430 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 LIX1LQ8IVB5 337 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 MCEMP1Q8IX19 187 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 CLEC4FQ8N1N0 589 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 GATSQ8NAP1 163 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ACBD4Q8NC06 268 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 NAXEQ8NCW5 288 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 IL17RDQ8NFM7 739 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TNIP2Q8NFZ5 429 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 OR5D16Q8NGK9 328 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 OR4A15Q8NGL6 344 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 OR4C3Q8NH37 302 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ADAMTS15Q8TE58 950 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ST8SIA2Q92186 375 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF75CPQ92670 426 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TFAP2CQ92754 450 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 MAELQ96JY0 434 aaKnown RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SLC35G5Q96KT7 338 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TEX37Q96LM6 180 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 OR7D2Q96RA2 312 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TRIB1Q96RU8 372 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SH3GL2Q99962 352 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 TUBA1CQ9BQE3 449 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 PIGUQ9H490 435 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 SERHL2Q9H4I8 314 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 PTGES2Q9H7Z7 377 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 VIPAS39Q9H9C1 493 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 KCNJ16Q9NPI9 418 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 UBQLN4Q9NRR5 601 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 ARGLU1Q9NWB6 273 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 FAF1Q9UNN5 650 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 RPH3AQ9Y2J0 694 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 KCNE3Q9Y6H6 103 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 INTS1Q8N201 2190 aaKnown RBP6.24□□□□□ -1.41
HMGN1-205ENST00000419378 KIAA1549Q9HCM3 1950 aa6.24□□□□□ -1.41
HMGN1-205ENST00000419378 MYO9AB2RTY4 2548 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 NPIPA5A0A0B4J1W7 369 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 PRSS51A0A1B0GVH4 220 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 OR2M5A3KFT3 312 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 MBD3L4A6NDZ8 208 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 MBD3L3A6NE82 208 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 MBD3L5A6NJ08 208 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 CD8B2A6NJW9 211 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 HSPB2A8KAH6 182 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 NPIPA7E9PJI5 369 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF195O14628 629 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 GMFGO60234 142 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 CPSF4O95639 269 aaKnown RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 NPIPA8P0DM63 369 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 HPGDP15428 266 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 IGFBP2P18065 325 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 ATP6V1C1P21283 382 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 CHMP24386 653 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 IL12AP29459 219 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 CEACAM8P31997 349 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 S100A3P33764 101 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 TIMP3P35625 211 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 ZNF136P52737 540 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 DGKQP52824 942 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 CLDN18P56856 261 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 UFM1P61960 85 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 SRYQ05066 204 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 C17orf67Q0P5P2 114 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 RCAN2Q14206 197 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 SF3B4Q15427 424 aaKnown RBP eCLIP6.23□□□□□ -1.412e-7■■■■□ 20.5
HMGN1-205ENST00000419378 CD226Q15762 336 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 HSPB2Q16082 182 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 SLC25A35Q3KQZ1 300 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 ANXA8L1Q5VT79 327 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 MEX3BQ6ZN04 569 aaKnown RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 C9orf106Q8NAJ2 232 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 RELL2Q8NC24 303 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 VPS37AQ8NEZ2 397 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 OR5M1Q8NGP8 315 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 MBD3L2Q8NHZ7 208 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-205ENST00000419378 ZPLD1Q8TCW7 415 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 LRRC8CQ8TDW0 803 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 PMM1Q92871 262 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 MARK4Q96L34 752 aa6.23□□□□□ -1.41
HMGN1-205ENST00000419378 C7orf26Q96N11 449 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms