RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 TMEM272A0A1B0GTI8 110 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SMIM28A0A1B0GU29 152 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SHISA8B8ZZ34 492 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TSTD3H0UI37 97 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 PYCARD-AS1I3L0S3 204 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 J3QW42 95 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SYT5O00445 386 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 RNASET2O00584 256 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 IRAK2O43187 625 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SEPT4O43236 478 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ZNF749O43361 778 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 EMC8O43402 210 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 MBTPS2O43462 519 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 PCDH8O95206 1070 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ASGR2P07307 311 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 C1GALT1C1LP0DN25 315 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 CD79AP11912 226 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ZNF16P17020 682 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ATF1P18846 271 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 XPAP23025 273 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 GABRR2P28476 465 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 S100A2P29034 98 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 AVPR2P30518 371 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 NRG3P56975 720 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 FOXO1Q12778 655 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 FZD5Q13467 585 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 DDX39BQ13838 428 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ARHGEF7Q14155 803 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SSPNQ14714 243 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 DHCR24Q15392 516 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 CSRP2Q16527 193 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TMEM244Q5VVB8 128 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 FRG2Q64ET8 278 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TCTN3Q6NUS6 607 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TRIM40Q6P9F5 258 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 MBOAT1Q6ZNC8 495 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 PLPPR4Q7Z2D5 763 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SLC36A1Q7Z2H8 476 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SCD5Q86SK9 330 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 LRRC56Q8IYG6 542 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 MUC20Q8N307 709 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 GTPBP8Q8N3Z3 284 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 OR5D16Q8NGK9 328 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SLC7A13Q8TCU3 470 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 BRIX1Q8TDN6 353 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 PAQR8Q8TEZ7 354 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 APOBEC4Q8WW27 367 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 MYLIPQ8WY64 445 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 GCDHQ92947 438 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 RFKQ969G6 155 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 CPNE2Q96FN4 548 aaPredicted RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 FRG2BQ96QU4 278 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TAAR9Q96RI9 348 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TRIB3Q96RU7 358 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 NRIP2Q9BQI9 281 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ORAI3Q9BRQ5 295 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TRMT61BQ9BVS5 477 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ADGRE3Q9BY15 652 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 CHST5Q9GZS9 411 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 LAT2Q9GZY6 243 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SMG9Q9H0W8 520 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ISG20L2Q9H9L3 353 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SEC61A2Q9H9S3 476 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 MMP26Q9NRE1 261 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 MRPL17Q9NRX2 175 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 TDP1Q9NUW8 608 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 KLK11Q9UBX7 282 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 LAMP5Q9UJQ1 280 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 ASF1AQ9Y294 204 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 EXOGQ9Y2C4 368 aaKnown RBP5.92□□□□□ -1.46
CCNT1-202ENST00000417344 PPP2R3BQ9Y5P8 575 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 LTBP4Q8N2S1 1624 aa5.92□□□□□ -1.46
CCNT1-202ENST00000417344 SCN1AP35498 2009 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 ALPK3Q96L96 1907 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 NYNRINQ9P2P1 1898 aaKnown RBP5.91□□□□□ -1.46
CCNT1-202ENST00000417344 ANKRD20A5PA0PJZ0 165 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 GLTPD2A6NH11 291 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 A6NLC8 198 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 MARCH11A6NNE9 402 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 IFNA2P01563 188 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 HOXB5P09067 269 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 ADRB3P13945 408 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 RAB5AP20339 215 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 HOXA5P20719 270 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 MMP11P24347 488 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 ACKR3P25106 362 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 MAT2AP31153 395 aaKnown RBP5.91□□□□□ -1.46
CCNT1-202ENST00000417344 ATP6V1E1P36543 226 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 CDX1P47902 265 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-202ENST00000417344 CCL23P55773 120 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 SMIM11AP58511 58 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 HBA1P69905 142 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 HGFACQ04756 655 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 TRAM1Q15629 374 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 INPP5JQ15735 1006 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-202ENST00000417344 USF2Q15853 346 aaPredicted RBP5.91□□□□□ -1.46
CCNT1-202ENST00000417344 DCAF4L1Q3SXM0 396 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 KRBOX4Q5JUW0 171 aa5.91□□□□□ -1.46
CCNT1-202ENST00000417344 UBE2NLQ5JXB2 153 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms