RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 LRP5LA4QPB2 252 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 TTC36A6NLP5 189 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 GJE1A6NN92 205 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 CYTIPO60759 359 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 TBX19O60806 448 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 ACP2P11117 423 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 PRPS2P11908 318 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 H2AFXP16104 143 aaPredicted RBP12.04□□□□□ -0.48
SSB-204ENST00000417292 IL2RGP31785 369 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
SSB-204ENST00000417292 HPCAL1P37235 193 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 RNF144AP50876 292 aaPredicted RBP12.04□□□□□ -0.48
SSB-204ENST00000417292 EMX2Q04743 252 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 CBLN3Q6UW01 205 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 MISPQ8IVT2 679 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 ZNF100Q8IYN0 542 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 ANKS4BQ8N8V4 417 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 UBQLN4Q9NRR5 601 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 ATP6V1HQ9UI12 483 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 FKBP7Q9Y680 259 aa12.04□□□□□ -0.48
SSB-204ENST00000417292 PRKDCP78527 4128 aaKnown RBP12.04□□□□□ -0.48
SSB-204ENST00000417292 HEATR1Q9H583 2144 aaKnown RBP12.04□□□□□ -0.48
SSB-204ENST00000417292 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 A0A1W2PQD3 144 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 CIB4A0PJX0 185 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 ZNF724A8MTY0 619 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 SCDO00767 359 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 SNNO75324 88 aaPredicted RBP12.03□□□□□ -0.48
SSB-204ENST00000417292 HPGDP15428 266 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 FRKP42685 505 aaPredicted RBP12.03□□□□□ -0.48
SSB-204ENST00000417292 SLC18A1P54219 525 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 FOXG1P55316 489 aaPredicted RBP12.03□□□□□ -0.48
SSB-204ENST00000417292 NME5P56597 212 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 PGS1Q32NB8 556 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 CCNJQ5T5M9 372 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 FBXW9Q5XUX1 488 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 HDXQ7Z353 690 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 R3HCC1LQ7Z5L2 792 aaKnown RBP12.03□□□□□ -0.48
SSB-204ENST00000417292 GALNT5Q7Z7M9 940 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 HOMEZQ8IX15 550 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 RIMKLAQ8IXN7 391 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 SLC16A11Q8NCK7 471 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 ZFP28Q8NHY6 868 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 ZFAND2BQ8WV99 257 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 MTERF3Q96E29 417 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 GIMAP5Q96F15 307 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 C16orf58Q96GQ5 468 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 ATP6V1G3Q96LB4 118 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 WDR55Q9H6Y2 383 aaPredicted RBP12.03□□□□□ -0.48
SSB-204ENST00000417292 THAP1Q9NVV9 213 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 HAO1Q9UJM8 370 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 ICAM5Q9UMF0 924 aa12.03□□□□□ -0.48
SSB-204ENST00000417292 CCT8L1PA6NM43 557 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 ATP6V1G2-DDX39BF2Z307 99 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 SDHDO14521 159 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 C6orf47O95873 294 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 IFI6P09912 130 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 PRKCAP17252 672 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 PRPS1L1P21108 318 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 EPHA3P29320 983 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 SLC7A1P30825 629 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 NTF4P34130 210 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 PHC1P78364 1004 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 GABRA6Q16445 453 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 DUSP5Q16690 384 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 ZSWIM7Q19AV6 140 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 VPS26BQ4G0F5 336 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 UBE2J2Q8N2K1 259 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 CDRT4Q8N9R6 151 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 WDR31Q8NA23 367 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 NUP43Q8NFH3 380 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 ZNF764Q96H86 408 aaPredicted RBP12.02□□□□□ -0.49
SSB-204ENST00000417292 MRGPRX4Q96LA9 322 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 MUS81Q96NY9 551 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 FKRPQ9H9S5 495 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 MEAF6Q9HAF1 191 aa12.02□□□□□ -0.49
SSB-204ENST00000417292 SIRT3Q9NTG7 399 aaPredicted RBP12.02□□□□□ -0.49
SSB-204ENST00000417292 ACSS1Q9NUB1 689 aaPredicted RBP12.02□□□□□ -0.49
SSB-204ENST00000417292 ARGLU1Q9NWB6 273 aaPredicted RBP12.02□□□□□ -0.49
SSB-204ENST00000417292 NOP53Q9NZM5 478 aaKnown RBP12.02□□□□□ -0.49
SSB-204ENST00000417292 GPC6Q9Y625 555 aaPredicted RBP12.02□□□□□ -0.49
SSB-204ENST00000417292 NPIPA5A0A0B4J1W7 369 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 NPIPA7E9PJI5 369 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 CFLARO15519 480 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 SASH3O75995 380 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 SNUPNO95149 360 aaKnown RBP12.01□□□□□ -0.49
SSB-204ENST00000417292 H6PDO95479 791 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 NUDT14O95848 222 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 NPIPA8P0DM63 369 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 LBPP18428 481 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 CLDN8P56748 225 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 ACTG1P63261 375 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 SLC25A3Q00325 362 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 MAD2L1Q13257 205 aaPredicted RBP12.01□□□□□ -0.49
SSB-204ENST00000417292 NDUFAF6Q330K2 333 aa12.01□□□□□ -0.49
SSB-204ENST00000417292 PDLIM3Q53GG5 364 aaPredicted RBP12.01□□□□□ -0.49
SSB-204ENST00000417292 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms