RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 HS6ST2Q96MM7 605 aa12□□□□□ -0.49
CNN3-203ENST00000415017 UBL7Q96S82 380 aaPredicted RBP12□□□□□ -0.49
CNN3-203ENST00000415017 BDH2Q9BUT1 245 aa12□□□□□ -0.49
CNN3-203ENST00000415017 REEP1Q9H902 201 aa12□□□□□ -0.49
CNN3-203ENST00000415017 MEPEQ9NQ76 525 aaPredicted RBP12□□□□□ -0.49
CNN3-203ENST00000415017 VDAC3Q9Y277 283 aa12□□□□□ -0.49
CNN3-203ENST00000415017 TMED7Q9Y3B3 224 aa12□□□□□ -0.49
CNN3-203ENST00000415017 CACNA1BQ00975 2339 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 SPTA1P02549 2419 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 ACOT7O00154 380 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 TNFRSF11BO00300 401 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 KLF4O43474 513 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 GMFGO60234 142 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 SUSD5O60279 629 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 HCN1O60741 890 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 ATP6V1G2O95670 118 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 FPR1P21462 350 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 GDF1P27539 372 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 IFNA8P32881 189 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 RAC1P63000 192 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNN3-203ENST00000415017 MERTKQ12866 999 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 KLRB1Q12918 225 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 SLC10A1Q14973 349 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 MICAQ29983 383 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 PODNL1Q6PEZ8 512 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 SHQ1Q6PI26 577 aaKnown RBP11.99□□□□□ -0.49
CNN3-203ENST00000415017 C5orf46Q6UWT4 87 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 MBOAT2Q6ZWT7 520 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 AMIGO2Q86SJ2 522 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 CHERPQ8IWX8 916 aaKnown RBP11.99□□□□□ -0.49
CNN3-203ENST00000415017 LINC00471Q8N535 108 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 STK35Q8TDR2 534 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 TMEM255BQ8WV15 326 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 LIPHQ8WWY8 451 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 ALPK1Q96QP1 1244 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 PIGQQ9BRB3 760 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 POTEKPQ9BYX7 375 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 GABARAPL1Q9H0R8 117 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 RPS6KB2Q9UBS0 482 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 CHRNA9Q9UGM1 479 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 DKKL1Q9UK85 242 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 ZNF337Q9Y3M9 751 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
CNN3-203ENST00000415017 TMEM72A0PK05 275 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 FAM166BA8MTA8 275 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 A8MVM7 634 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SHISA8B8ZZ34 492 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 FAM47E-STBD1D6RA91 191 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 WISP2O76076 250 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 TSPAN19P0C672 248 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 ZNF24P17028 368 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 GCKP35557 465 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 IST1P53990 364 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 UGT2B15P54855 530 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 CLDN15P56746 228 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SPIBQ01892 262 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 PLGLB1Q02325 96 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 PRKCDQ05655 676 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SLC34A1Q06495 639 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SELENBP1Q13228 472 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 BCL2A1Q16548 175 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 EXOC3L2Q2M3D2 409 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 WIPI1Q5MNZ9 446 aaPredicted RBP11.98□□□□□ -0.49
CNN3-203ENST00000415017 VASNQ6EMK4 673 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 C1orf94Q6P1W5 598 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 TRILQ7L0X0 811 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 YRDCQ86U90 279 aaKnown RBP11.98□□□□□ -0.49
CNN3-203ENST00000415017 EPHX4Q8IUS5 362 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SVOPLQ8N434 492 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 OR5K1Q8NHB7 308 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 NEIL3Q8TAT5 605 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SLC25A43Q8WUT9 341 aaPredicted RBP11.98□□□□□ -0.49
CNN3-203ENST00000415017 TMEM239Q8WW34 195 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 ADGRG7Q96K78 797 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 PTDSS2Q9BVG9 487 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 SAMHD1Q9Y3Z3 626 aaKnown RBP11.98□□□□□ -0.49
CNN3-203ENST00000415017 AP4B1Q9Y6B7 739 aa11.98□□□□□ -0.49
CNN3-203ENST00000415017 COL6A6A6NMZ7 2263 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 ELOA3DA6NLF2 546 aaPredicted RBP11.97□□□□□ -0.49
CNN3-203ENST00000415017 FTCDNL1E5RQL4 147 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 H0Y3Z8 333 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 ACTL6AO96019 429 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 CRYABP02511 175 aaKnown RBP11.97□□□□□ -0.49
CNN3-203ENST00000415017 CBLP22681 906 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 CXCR1P25024 350 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 OMPP47874 163 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 LHX2P50458 406 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 TDGF1P3P51864 188 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 PPP1R8Q12972 351 aaKnown RBP11.97□□□□□ -0.49
CNN3-203ENST00000415017 CTU2Q2VPK5 515 aaKnown RBP11.97□□□□□ -0.49
CNN3-203ENST00000415017 ELOA3BQ3SY89 546 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 DCST1Q5T197 706 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 C3orf33Q6P1S2 294 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 FAHD1Q6P587 224 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 TBPL2Q6SJ96 375 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 CD300LDQ6UXZ3 194 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 TMPRSS11FQ6ZWK6 438 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 ZER1Q7Z7L7 766 aa11.97□□□□□ -0.49
CNN3-203ENST00000415017 GGNQ86UU5 652 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms