RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 PLAURQ03405 335 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF234Q14588 700 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 NDUFAF6Q330K2 333 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 CLLU1Q5K131 121 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 PXKQ7Z7A4 578 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 C12orf76Q8N812 135 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 SRFBP1Q8NEF9 429 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 PELI1Q96FA3 418 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 KLHL15Q96M94 604 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 TSPAN10Q9H1Z9 355 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 TRPV4Q9HBA0 871 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 COPS3Q9UNS2 423 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 GXYLT2A0PJZ3 443 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 CACNB4O00305 520 aaPredicted RBP13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 SYT5O00445 386 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 SELENOFO60613 162 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 RPP14O95059 124 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 EML2O95834 649 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 CSF2RAP15509 400 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 CCR9P51686 369 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 ERVK-21P61565 698 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 MRM1Q6IN84 353 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 PRSS42Q7Z5A4 293 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 BOLLQ8N9W6 283 aaKnown RBP13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 OR8K3Q8NH51 312 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 WBP1Q96G27 269 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 GAL3ST1Q99999 423 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 KCNK15Q9H427 330 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 SCP2D1Q9UJQ7 156 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 KCNMB2Q9Y691 235 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 GON4LQ3T8J9 2241 aa13.46□□□□□ -0.25
SEMA3F-202ENST00000413852 LRRC72A6NJI9 287 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 PIN1P1O15428 100 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 FLRT2O43155 660 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 FMO6PO60774 539 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 UBL3O95164 117 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 RPS27P42677 84 aaKnown RBP13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 SOX2P48431 317 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 RPS11P62280 158 aaKnown RBP eCLIP13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 LINC00303Q3SY05 128 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 DMKNQ6E0U4 476 aaPredicted RBP13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 SLC51BQ86UW2 128 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 GID4Q8IVV7 300 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 CNOT9Q92600 299 aaKnown RBP13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 ZNF707Q96C28 371 aaPredicted RBP13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 SDF2Q99470 211 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 GSX2Q9BZM3 304 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 PIPOXQ9P0Z9 390 aa13.46□□□□□ -0.26
SEMA3F-202ENST00000413852 TRBV2A0A0J9YWF9 115 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 PRR32B1ATL7 298 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 VEGFDO43915 354 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 KHDRBS3O75525 346 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 LPLP06858 475 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 EDNRAP25101 427 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 PRKAR1BP31321 381 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 MMP15P51511 669 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 ZIC1Q15915 447 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 TMEM64Q6YI46 380 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 ERN2Q76MJ5 926 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 FAM98AQ8NCA5 519 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR6M1Q8NGM8 313 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 HAVCR2Q8TDQ0 301 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 ZNF514Q96K75 400 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 DIABLOQ9NR28 239 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 SDHAF2Q9NX18 166 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 PHF11Q9UIL8 331 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 MAB21L2Q9Y586 359 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 TEX51A0A1B0GUA7 166 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 ARPC5O15511 151 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 SC5DO75845 299 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 TSPAN9O75954 239 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 CPMP14384 443 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 BMP8BP34820 402 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 YOD1Q5VVQ6 348 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 ATRAIDQ6UW56 229 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 BMP8AQ7Z5Y6 402 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 COX14Q96I36 57 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 SIGLEC7Q9Y286 467 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 RWDD3Q9Y3V2 267 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 PEX14O75381 377 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 HIST1H1CP16403 213 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 EEF1A1P68104 462 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 TAGLNQ01995 201 aaKnown RBP13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 HTR4Q13639 388 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 FGL2Q14314 439 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 NNATQ16517 81 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 KCTD20Q7Z5Y7 419 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR2L3Q8NG85 312 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR5T3Q8NGG3 340 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR5M1Q8NGP8 315 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 OR4C6Q8NH72 309 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 FBXW5Q969U6 566 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 TSSK2Q96PF2 358 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 SLC6A17Q9H1V8 727 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 CMC2Q9NRP2 79 aa13.45□□□□□ -0.26
SEMA3F-202ENST00000413852 C2orf42Q9NWW7 574 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms