RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	RBM45	Q8IUH3	476 aa	Known RBP	11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ELOA3	Q8NG57	546 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	RNF217	Q8TC41	542 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	C3orf49	Q96BT1	292 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	SLC47A1	Q96FL8	570 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	PYURF	Q96I23	114 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	KLHL15	Q96M94	604 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	C12orf10	Q9HB07	376 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ALKBH4	Q9NXW9	302 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	CACNA1C	Q13936	2221 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725		A0A0B4J2E0	115 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725		A0A1B0GX12	115 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	TRAPPC13	A5PLN9	417 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	EIF1AY	O14602	144 aa	Known RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	ACOT8	O14734	319 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	ZNF208	O43345	1280 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	EFNA2	O43921	213 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	TPST2	O60704	377 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	CIB2	O75838	187 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	STS	P08842	583 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	HOXD4	P09016	255 aa	Predicted RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	TFPI	P10646	304 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	CCNA2	P20248	432 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	IL11	P20809	199 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	CA7	P43166	264 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	UQCRFS1	P47985	274 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	CLK1	P49759	484 aa	Known RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	CLDN20	P56880	219 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	SYT14P1	Q58G82	188 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	ATG4D	Q86TL0	474 aa	Predicted RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	CYP4Z1	Q86W10	505 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	ADGRG3	Q86Y34	549 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	DOLPP1	Q86YN1	238 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	PRR7	Q8TB68	274 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	ZPLD1	Q8TCW7	415 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	ADAMTS16	Q8TE57	1224 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	DDIT4L	Q96D03	193 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	PRRC1	Q96M27	445 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	PRR14	Q9BWN1	585 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	PAQR5	Q9NXK6	330 aa	Predicted RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	SLC7A8	Q9UHI5	535 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	SH3BGRL2	Q9UJC5	107 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	TINAG	Q9UJW2	476 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	POMP	Q9Y244	141 aa		11.85	□□□□□ -0.51
SF1-206	ENST00000413725	FAM32A	Q9Y421	112 aa	Known RBP	11.85	□□□□□ -0.51
SF1-206	ENST00000413725	TMEM72	A0PK05	275 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	AQP12B	A6NM10	295 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	TNFSF11	O14788	317 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	ADAMDEC1	O15204	470 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	CHP2	O43745	196 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	OR5F1	O95221	314 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	WISP1	O95388	367 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	OPN1LW	P04000	364 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	PLA2G2A	P14555	144 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	ITGA2	P17301	1181 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	ACVR2A	P27037	513 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	EIF1AX	P47813	144 aa	Known RBP	11.84	□□□□□ -0.51
SF1-206	ENST00000413725	SUCLG1	P53597	346 aa	Known RBP	11.84	□□□□□ -0.51
SF1-206	ENST00000413725	CDH12	P55289	794 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	SGCB	Q16585	318 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	ZSCAN26	Q16670	478 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.84	□□□□□ -0.51
SF1-206	ENST00000413725	FAM98B	Q52LJ0	330 aa	Known RBP	11.84	□□□□□ -0.51
SF1-206	ENST00000413725	EMC4	Q5J8M3	183 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	C1orf185	Q5T7R7	199 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	HBM	Q6B0K9	141 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	GGN	Q86UU5	652 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	AQP12A	Q8IXF9	295 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	FAM86B1	Q8N7N1	296 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	OR2V1	Q8NHB1	315 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	PHF10	Q8WUB8	498 aa	Known RBP	11.84	□□□□□ -0.51
SF1-206	ENST00000413725	SLC38A4	Q969I6	547 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	OR5B2	Q96R09	309 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	AMBRA1	Q9C0C7	1298 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	MAGIX	Q9H6Y5	334 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	TIGAR	Q9NQ88	270 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	HDGFL3	Q9Y3E1	203 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725	ENPP4	Q9Y6X5	453 aa		11.84	□□□□□ -0.51
SF1-206	ENST00000413725		A0A087WUJ7	227 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725		A0A0J9YW62	118 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725		A0A1B0GUH1	482 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	TCRBV5S2	A0A599	114 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725		A8MVM7	634 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725		J3QKU1	62 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	THRB	P10828	461 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	SHC1	P29353	583 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	CLDN15	P56746	228 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	CHRNB3	Q05901	458 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	ST3GAL3	Q11203	375 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	CTU2	Q2VPK5	515 aa	Known RBP	11.83	□□□□□ -0.52
SF1-206	ENST00000413725	ACSF3	Q4G176	576 aa	Predicted RBP	11.83	□□□□□ -0.52
SF1-206	ENST00000413725	C1orf146	Q5VVC0	180 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	C1QL3	Q5VWW1	255 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	C5orf46	Q6UWT4	87 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	SPATA24	Q86W54	205 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	OR10D3	Q8NH80	312 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	STK35	Q8TDR2	534 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	SLC41A3	Q96GZ6	507 aa		11.83	□□□□□ -0.52
SF1-206	ENST00000413725	MPP4	Q96JB8	637 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms