RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CKLFQ9UBR5 152 aa7.97□□□□□ -1.13
PBRM1-209ENST00000412587 ZNF230Q9UIE0 474 aaPredicted RBP7.97□□□□□ -1.13
PBRM1-209ENST00000412587 HIF3AQ9Y2N7 669 aa7.97□□□□□ -1.13
PBRM1-209ENST00000412587 FBP1P09467 338 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 PRF1P14222 555 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 CNR1P21554 472 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 PCMT1P22061 227 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 CDKN1CP49918 316 aaPredicted RBP7.96□□□□□ -1.13
PBRM1-209ENST00000412587 RBBP4Q09028 425 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 NXPE4Q6UWF7 544 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 USP53Q70EK8 1073 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.13
PBRM1-209ENST00000412587 TMEM173Q86WV6 379 aaPredicted RBP7.96□□□□□ -1.13
PBRM1-209ENST00000412587 ZNF383Q8NA42 475 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 SUMF2Q8NBJ7 301 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 RELL2Q8NC24 303 aaPredicted RBP7.96□□□□□ -1.13
PBRM1-209ENST00000412587 DUSP18Q8NEJ0 188 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 NLGN4YQ8NFZ3 816 aaPredicted RBP7.96□□□□□ -1.13
PBRM1-209ENST00000412587 CREB3L4Q8TEY5 395 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 SLC39A7Q92504 469 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 DCUN1D4Q92564 292 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 SORCS2Q96PQ0 1159 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 F2RL3Q96RI0 385 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 CDC6Q99741 560 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 CPEB1Q9BZB8 566 aaKnown RBP7.96□□□□□ -1.13
PBRM1-209ENST00000412587 STRADBQ9C0K7 418 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 CRLF2Q9HC73 371 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 STRCP1A6NGW2 1772 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 MAST2Q6P0Q8 1798 aa7.96□□□□□ -1.13
PBRM1-209ENST00000412587 A0A0U1RQS6 177 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 LINC01553A4QN01 128 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 SGK494L7N484 410 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 GPX5O75715 221 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 APBB3O95704 486 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 IFNA21P01568 189 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ANXA7P20073 488 aaKnown RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 SH3BP2P78314 561 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 KCNJ10P78508 379 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 FOXO1Q12778 655 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 PLEKHN1Q494U1 663 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ACTBL2Q562R1 376 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ZNF789Q5FWF6 425 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ANKRD33Q7Z3H0 272 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 SIAH3Q8IW03 269 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 METTL27Q8N6F8 245 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 OR4K17Q8NGC6 315 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 SPPL3Q8TCT6 385 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 RAB8BQ92930 207 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 FUBP1Q96AE4 644 aaKnown RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ZBP1Q9H171 429 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 METTL9Q9H1A3 318 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ATG4BQ9Y4P1 393 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 GPR45Q9Y5Y3 372 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 V9GYS6 101 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 M0QZK8 103 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 RTCAO00442 366 aaKnown RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 PRODHO43272 600 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 LATO43561 262 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 GGCTO75223 188 aaKnown RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 RGS11O94810 467 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 HOXC13P31276 330 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 GABRA5P31644 462 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 PTGFRP43088 359 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 PTH2RP49190 550 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 SGCBQ16585 318 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 HEPHL1Q6MZM0 1159 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 REEP3Q6NUK4 255 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 DPY19L2P1Q6NXN4 242 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ZNF585AQ6P3V2 769 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 ETV3LQ6ZN32 361 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 CSNK1A1LQ8N752 337 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 PNPLA1Q8N8W4 532 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 OR6K6Q8NGW6 343 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 OR5P2Q8WZ92 322 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 MR1Q95460 341 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 TSPAN10Q9H1Z9 355 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 CDCP1Q9H5V8 836 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 KLRF1Q9NZS2 232 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 TNRC6CQ9HCJ0 1690 aaKnown RBP7.96□□□□□ -1.14
PBRM1-209ENST00000412587 SCN9AQ15858 1988 aa7.96□□□□□ -1.14
PBRM1-209ENST00000412587 MEIKINA0A087WXM9 373 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 EEF1E1-BLOC1S5C9J1V9 151 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 FAAHO00519 579 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 UBL3O95164 117 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 SLC16A8O95907 504 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 MGMTP16455 207 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 SLC6A11P48066 632 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 RELQ04864 619 aaPredicted RBP7.95□□□□□ -1.14
PBRM1-209ENST00000412587 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
PBRM1-209ENST00000412587 FAM78AQ5JUQ0 283 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 KDM4DQ6B0I6 523 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 PARS2Q7L3T8 475 aaKnown RBP7.95□□□□□ -1.14
PBRM1-209ENST00000412587 GLCCI1Q86VQ1 547 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 C12orf40Q86WS4 652 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 KLBQ86Z14 1044 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 PIANPQ8IYJ0 282 aa7.95□□□□□ -1.14
PBRM1-209ENST00000412587 BRIX1Q8TDN6 353 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms