RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 EXT2Q93063 718 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 PPP1R14AQ96A00 147 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 TM4SF18Q96CE8 201 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 MRGPRX4Q96LA9 322 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 ANKRD27Q96NW4 1050 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 FAIM2Q9BWQ8 316 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 MRPL1Q9BYD6 325 aaKnown RBP5.43□□□□□ -1.54
LINC00396-201ENST00000411690 MS4A7Q9GZW8 240 aaPredicted RBP5.43□□□□□ -1.54
LINC00396-201ENST00000411690 MS4A5Q9H3V2 200 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 OXSMQ9NWU1 459 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 UPB1Q9UBR1 384 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 DCTN4Q9UJW0 460 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 ANGPTL3Q9Y5C1 460 aa5.43□□□□□ -1.54
LINC00396-201ENST00000411690 IGKV3D-15A0A087WSY6 115 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 CCDC151A5D8V7 595 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 CCDC188H7C350 402 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 PDLIM1O00151 329 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 FRS3O43559 492 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 KCNH1O95259 989 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 ESRRBO95718 433 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 OXSR1O95747 527 aaPredicted RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 NUDT14O95848 222 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 HPGDP15428 266 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 CDH2P19022 906 aaPredicted RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 PAX7P23759 505 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 NTF4P34130 210 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 GDNFP39905 211 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 MTNR1AP48039 350 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 PIK3CGP48736 1102 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 ATP4BP51164 291 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 SLC12A2P55011 1212 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 POU3F1Q03052 451 aaPredicted RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 MVKQ03426 396 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 PDK3Q15120 406 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 OR4D1Q15615 310 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 REP15Q6BDI9 236 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 ANKRD16Q6P6B7 361 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 R3HCC1LQ7Z5L2 792 aaKnown RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 SAMD14Q8IZD0 417 aaPredicted RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 SPC24Q8NBT2 197 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 OR4C3Q8NH37 302 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 B4GALNT2Q8NHY0 566 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 JADE3Q92613 823 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 SGCDQ92629 289 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 YIPF5Q969M3 257 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 ARL5BQ96KC2 179 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 OR5B2Q96R09 309 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 BBS4Q96RK4 519 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 KLHDC3Q9BQ90 382 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 SLC30A2Q9BRI3 323 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 ZNF416Q9BWM5 594 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 GATA5Q9BWX5 397 aaPredicted RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 C3orf14Q9HBI5 128 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 NECAP2Q9NVZ3 263 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 AURKAIP1Q9NWT8 199 aaPredicted RBP5.42□□□□□ -1.54
LINC00396-201ENST00000411690 REV1Q9UBZ9 1251 aa5.42□□□□□ -1.54
LINC00396-201ENST00000411690 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 OR6C65A6NJZ3 312 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 M0R233 179 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 GPR171O14626 319 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 HOXA3O43365 443 aaPredicted RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 SYNGR3O43761 229 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 PIP5K1CO60331 668 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 UGDHO60701 494 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 CLPXO76031 633 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 NDUFA7O95182 113 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 IGKV1D-16P01601 117 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 IGHV2-5P01817 119 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 KRT14P02533 472 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 OPN1MWP04001 364 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 GSNP06396 782 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 CECR9P0C854 216 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 OPN1MW2P0DN77 364 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 OPN1MW3P0DN78 364 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 CD1DP15813 335 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 CALCRP30988 508 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 GABRA3P34903 492 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 MPIP34949 423 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 PRIM2P49643 509 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 ATP6V0D1P61421 351 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 LCN2P80188 198 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 MRPS11P82912 194 aaKnown RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 HGFACQ04756 655 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 SELENBP1Q13228 472 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 SLC29A2Q14542 456 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 PDCD1Q15116 288 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 TRADDQ15628 312 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 HIKESHIQ53FT3 197 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 GLE1Q53GS7 698 aaKnown RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 KLF17Q5JT82 389 aaPredicted RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 OTUD3Q5T2D3 398 aaPredicted RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 AVPI1Q5T686 147 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 FIP1L1Q6UN15 594 aaKnown RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 COMMD6Q7Z4G1 85 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 ZC3HC1Q86WB0 502 aaKnown RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 ADGRG3Q86Y34 549 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 MISPQ8IVT2 679 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 WDFY1Q8IWB7 410 aa5.41□□□□□ -1.54
LINC00396-201ENST00000411690 GSPT2Q8IYD1 628 aaKnown RBP5.41□□□□□ -1.54
LINC00396-201ENST00000411690 FAM9CQ8IZT9 166 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms