RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 POMZP3Q6PJE2 187 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 SMARCD3Q6STE5 483 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 OPN5Q6U736 354 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 BCDIN3DQ7Z5W3 292 aaKnown RBP12.79□□□□□ -0.36
GPNMB-203ENST00000409458 OAFQ86UD1 273 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 RAB43Q86YS6 212 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 IL22RA1Q8N6P7 574 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 OR2T33Q8NG76 320 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 OR51A7Q8NH64 312 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 TRUB1Q8WWH5 349 aaKnown RBP12.79□□□□□ -0.36
GPNMB-203ENST00000409458 MCCC2Q9HCC0 563 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 ASCL3Q9NQ33 180 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 FKBP14Q9NWM8 211 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 MED11Q9P086 117 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 PPP4R1LQ9P1A2 415 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 MPDZO75970 2070 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 BHLHE40O14503 412 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 TP53I11O14683 189 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 TLX2O43763 284 aaPredicted RBP12.78□□□□□ -0.36
GPNMB-203ENST00000409458 HCN1O60741 890 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 PTP4A3O75365 173 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 OR7A10O76100 309 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 MT-ND2P03891 347 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 SERPINA7P05543 415 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 CCNA2P20248 432 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 SUMO3P55854 103 aaPredicted RBP12.78□□□□□ -0.36
GPNMB-203ENST00000409458 EFNB1P98172 346 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 NEDD8Q15843 81 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 PRAMEF20Q5VT98 475 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 B3GNTL1Q67FW5 361 aaPredicted RBP12.78□□□□□ -0.36
GPNMB-203ENST00000409458 RPL13AP3Q6NVV1 102 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 DTX1Q86Y01 620 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 SIRT6Q8N6T7 355 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 LRRC17Q8N6Y2 441 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 TMEM163Q8TC26 289 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 IPCEF1Q8WWN9 437 aaPredicted RBP12.78□□□□□ -0.36
GPNMB-203ENST00000409458 ADAMTS14Q8WXS8 1223 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 TMIGD2Q96BF3 282 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 SLC38A2Q96QD8 506 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 TNFRSF13CQ96RJ3 184 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 NPAS1Q99742 590 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 FAM117AQ9C073 453 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 CCDC90BQ9GZT6 254 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 UBQLN3Q9H347 655 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 HHATLQ9HCP6 504 aa12.78□□□□□ -0.36
GPNMB-203ENST00000409458 IGLV3-32A0A0A0MS00 114 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 SH3D21A4FU49 640 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 SURF4O15260 269 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 RCBTB2O95199 551 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 IGF2P01344 180 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 POLR2HP52434 150 aaKnown RBP12.77□□□□□ -0.36
GPNMB-203ENST00000409458 TGIF1Q15583 401 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 INPP5JQ15735 1006 aaPredicted RBP12.77□□□□□ -0.36
GPNMB-203ENST00000409458 ZNF74Q16587 644 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 OCLNQ16625 522 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 ZBED5Q49AG3 693 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 ZNF468Q5VIY5 522 aaPredicted RBP12.77□□□□□ -0.36
GPNMB-203ENST00000409458 XAF1Q6GPH4 301 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 ARSKQ6UWY0 536 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 GRINAQ7Z429 371 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 GALNT15Q8N3T1 639 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 GGHQ92820 318 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.36
GPNMB-203ENST00000409458 SIGLEC11Q96RL6 698 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 PRRG3Q9BZD7 231 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 SH2D2AQ9NP31 389 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 CCNB1IP1Q9NPC3 277 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 DLL3Q9NYJ7 618 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 GPR83Q9NYM4 423 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 GPR52Q9Y2T5 361 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 SNX5Q9Y5X3 404 aa12.77□□□□□ -0.36
GPNMB-203ENST00000409458 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 EML6Q6ZMW3 1958 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.37
GPNMB-203ENST00000409458 TMED7-TICAM2A0A0A6YYA0 188 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 TMEM72A0PK05 275 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 CLCA1A8K7I4 914 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 RGS10O43665 173 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 SLC2A10O95528 541 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 CCL3P10147 92 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 PRKCAP17252 672 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 BMP7P18075 431 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 PCMT1P22061 227 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 CXCR1P25024 350 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 MASP1P48740 699 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 SLC9A3P48764 834 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 PMS2P3Q13401 168 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 GXYLT1Q4G148 440 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 SYT14P1Q58G82 188 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 H3F3CQ6NXT2 135 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.37
GPNMB-203ENST00000409458 FAM26EQ8N5C1 309 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 TMEM156Q8N614 296 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 LRR1Q96L50 414 aa12.77□□□□□ -0.37
GPNMB-203ENST00000409458 MOGAT1Q96PD6 335 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms