RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 SEMA4GQ9NTN9 838 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ZNF281Q9Y2X9 895 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 MN1Q10571 1320 aaPredicted RBP9.17□□□□□ -0.94
HERC3-202ENST00000402738 UBR1Q8IWV7 1749 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 DCCP43146 1447 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CDHR4A6H8M9 788 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 AIPO00170 330 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SERPINA7P05543 415 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 ETV5P41161 510 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 HTD2P86397 168 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 KLHDC8AQ8IYD2 350 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 OR13C9Q8NGT0 318 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CREB3L4Q8TEY5 395 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 SLC25A32Q9H2D1 315 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.17□□□□□ -0.94
HERC3-202ENST00000402738 KLRF1Q9NZS2 232 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 FLVCR2Q9UPI3 526 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 PRSS21Q9Y6M0 314 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 CAMTA1Q9Y6Y1 1673 aa9.17□□□□□ -0.94
HERC3-202ENST00000402738 A0A0U1RQF3 1178 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 AGAP14A8MT82 685 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 DPM1O60762 260 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 ZNF623O75123 536 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 GJB3O75712 270 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 ITGB2P05107 769 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 FUT1P19526 365 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 RAD52P43351 418 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 UBE2MP61081 183 aaKnown RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SNTB1Q13884 538 aaKnown RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 HENMT1Q5T8I9 393 aaKnown RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 ASPGQ86U10 573 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SULF2Q8IWU5 870 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 KCNRGQ8N5I3 272 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 OR9A2Q8NGT5 310 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 TEPSINQ96N21 525 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SEMA4CQ9C0C4 833 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 ARNT2Q9HBZ2 717 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 EDN1P05305 212 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 NR2C1P13056 603 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 ADRA1AP35348 466 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 HSF5Q4G112 596 aaPredicted RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 TRAPPC6BQ86SZ2 158 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 CCDC71LQ8N9Z2 235 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 FBXW5Q969U6 566 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 OR2A14Q96R47 310 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 OR52A5Q9H2C5 316 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 NDUFB11Q9NX14 153 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 FZD9O00144 591 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SURF4O15260 269 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SCO2O43819 266 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 TMEM225BP0DP42 221 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 LAG3P18627 525 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 ELAVL4P26378 380 aaKnown RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 CD80P33681 288 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 UPP1Q16831 310 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 PUS10Q3MIT2 529 aaKnown RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 PRSS36Q5K4E3 855 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 COX20Q5RI15 118 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 C6orf132Q5T0Z8 1188 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 CCDC190Q86UF4 302 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 RIMKLAQ8IXN7 391 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 RAB39BQ96DA2 213 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 CSF3RQ99062 836 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 PAAF1Q9BRP4 392 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 NMNAT2Q9BZQ4 307 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 WASF3Q9UPY6 502 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 KPTNQ9Y664 436 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SEC14L5O43304 696 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SERPINA5P05154 406 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 GLAP06280 429 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 LMAN2Q12907 356 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 NUMA1Q14980 2115 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 SLC35F3Q8IY50 421 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 AKR7LQ8NHP1 331 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 HERVK_113Q902F9 699 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 PITX2Q99697 317 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 KATNB1Q9BVA0 655 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 CDCA4Q9BXL8 241 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
HERC3-202ENST00000402738 ASB6Q9NWX5 421 aa9.16□□□□□ -0.94
HERC3-202ENST00000402738 TCRBV5S1A1TA0A578 114 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 WASH4PA8MWX3 477 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 GPRIN2O60269 458 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 DUSP11O75319 330 aaKnown RBP9.15□□□□□ -0.94
HERC3-202ENST00000402738 EPHA2P29317 976 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 SNRPGP62308 76 aaKnown RBP9.15□□□□□ -0.94
HERC3-202ENST00000402738 C21orf62-AS1Q17RA5 79 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 TMEM35AQ53FP2 167 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 METTL27Q8N6F8 245 aaPredicted RBP9.15□□□□□ -0.94
HERC3-202ENST00000402738 PLPP5Q8NEB5 264 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 OR4K17Q8NGC6 315 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 OR1S1Q8NH92 325 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 SLC38A5Q8WUX1 472 aa9.15□□□□□ -0.94
HERC3-202ENST00000402738 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms