RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 DCAF13Q9NV06 445 aaKnown RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 MRTO4Q9UKD2 239 aaKnown RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 FBN1P35555 2871 aaKnown RBP9.3□□□□□ -0.92
NEDD8-202ENST00000396828 JMJD1CQ15652 2540 aa9.3□□□□□ -0.92
NEDD8-202ENST00000396828 TCRBV3S1A0A5B6 114 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 DHRS12A0PJE2 317 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 DEFB108AA8MXU0 73 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 HCRTR2O43614 444 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 STX11O75558 287 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 PGM3O95394 542 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 H6PDO95479 791 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF682O95780 498 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 C8BP07358 591 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ETS2P15036 469 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ATP6V1C1P21283 382 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 DPP4P27487 766 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 CCKARP32238 428 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 MAP3K8P41279 467 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ERFP50548 548 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 PSMD4P55036 377 aaKnown RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 NKX6-1P78426 367 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 MRPS22P82650 360 aaKnown RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 RIPK1Q13546 671 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 CYP27C1Q4G0S4 372 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 FAM98BQ52LJ0 330 aaKnown RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 AAGABQ6PD74 315 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF474Q6S9Z5 364 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ENPP6Q6UWR7 440 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 LRRC74BQ6ZQY2 392 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 BTLAQ7Z6A9 289 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 GRAMD2AQ8IUY3 354 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 UBQLNLQ8IYU4 475 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ANKFN1Q8N957 763 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 PIK3R3Q92569 461 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 PMM1Q92871 262 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 TMCO6Q96DC7 493 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 HS3ST6Q96QI5 342 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 PIGQQ9BRB3 760 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 OPN3Q9H1Y3 402 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 DSN1Q9H410 356 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 YY1AP1Q9H869 796 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 MTHFD2LQ9H903 347 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-202ENST00000396828 POLE3Q9NRF9 147 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 KLHL28Q9NXS3 571 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 MED11Q9P086 117 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 BOLA1Q9Y3E2 137 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 TESMINQ9Y4I5 508 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 KCNE3Q9Y6H6 103 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 HEATR5AQ86XA9 2040 aa9.29□□□□□ -0.92
NEDD8-202ENST00000396828 ARID1AO14497 2285 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 TCRBV5S2A0A599 114 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 SHISA8B8ZZ34 492 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 M0QX08 132 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 SCO2O43819 266 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 MGRN1O60291 552 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 SMNDC1O75940 238 aaKnown RBP eCLIP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 KCNK2O95069 426 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CHRM4P08173 479 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 GUSBP08236 651 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 INHBBP09529 407 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CHMP24386 653 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 KRT20P35900 424 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 KIR2DL2P43627 348 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 RFX3P48380 749 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 PNLIPRP2P54317 469 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CLDN20P56880 219 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 PCBP3P57721 371 aaKnown RBP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 SELENOWP63302 87 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CHRNB3Q05901 458 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 FUT5Q11128 374 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 DECR1Q16698 335 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CYBRD1Q53TN4 286 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 RPS26P11Q5JNZ5 115 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 FKBP9P1Q75LS8 142 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CBLL1Q75N03 491 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 EIF3MQ7L2H7 374 aaKnown RBP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF550Q7Z398 422 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ARMC8Q8IUR7 673 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 CNEP1R1Q8N9A8 125 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 FADS6Q8N9I5 356 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 OR2M3Q8NG83 312 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 SMPDL3BQ92485 455 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF845Q96IR2 970 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 TPD52L3Q96J77 140 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ZFP3Q96NJ6 502 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 SDF2Q99470 211 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 DCLRE1BQ9H816 532 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 DKKL1Q9UK85 242 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 BAG5Q9UL15 447 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 EDARQ9UNE0 448 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF232Q9UNY5 417 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 AURKCQ9UQB9 309 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 MRPS18CQ9Y3D5 142 aaKnown RBP9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ZNF337Q9Y3M9 751 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 WDR45Q9Y484 360 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 AP4S1Q9Y587 144 aa9.28□□□□□ -0.92
NEDD8-202ENST00000396828 ROS1P08922 2347 aa9.27□□□□□ -0.92
NEDD8-202ENST00000396828 GXYLT2A0PJZ3 443 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms