RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 PGRP06401 933 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 SOD3P08294 240 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 TFPIP10646 304 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 APOBEC1P41238 236 aaKnown RBP15.94■□□□□ 0.14
CXCL12-204ENST00000395793 BSPH1Q075Z2 132 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 HHATQ5VTY9 493 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 GRINAQ7Z429 371 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 ADGRG3Q86Y34 549 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 PNPT1Q8TCS8 783 aaKnown RBP15.94■□□□□ 0.14
CXCL12-204ENST00000395793 MGARPQ8TDB4 240 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 HSD17B8Q92506 261 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 ARL8AQ96BM9 186 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 PANX1Q96RD7 426 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 BDH2Q9BUT1 245 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.94■□□□□ 0.14
CXCL12-204ENST00000395793 NPAP1Q9NZP6 1156 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 LAMP3Q9UQV4 416 aa15.94■□□□□ 0.14
CXCL12-204ENST00000395793 IGHV3-9P01782 118 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 DANCRP0C864 163 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 RPS4Y1P22090 263 aaKnown RBP15.93■□□□□ 0.14
CXCL12-204ENST00000395793 CSNK2A1P68400 391 aaPredicted RBP15.93■□□□□ 0.14
CXCL12-204ENST00000395793 STK11Q15831 433 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 MAVSQ7Z434 540 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 SPATA19Q7Z5L4 167 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 GALNT5Q7Z7M9 940 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 MTDHQ86UE4 582 aaKnown RBP15.93■□□□□ 0.14
CXCL12-204ENST00000395793 ARFGAP2Q8N6H7 521 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 TRNT1Q96Q11 434 aaKnown RBP15.93■□□□□ 0.14
CXCL12-204ENST00000395793 OR52E6Q96RD3 313 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 CXorf56Q9H5V9 222 aa15.93■□□□□ 0.14
CXCL12-204ENST00000395793 ESRP2Q9H6T0 727 aaKnown RBP15.93■□□□□ 0.14
CXCL12-204ENST00000395793 CR1P17927 2039 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 ABCA2Q9BZC7 2435 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 AGAP5A6NIR3 686 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 OVOL3O00110 214 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 HDAC3O15379 428 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 PMS2P2O95744 297 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 CD3EP07766 207 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 KITP10721 976 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 CCNA2P20248 432 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 IDH2P48735 452 aaKnown RBP15.92■□□□□ 0.14
CXCL12-204ENST00000395793 MVDP53602 400 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 FOXG1P55316 489 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-204ENST00000395793 ATP5J2P56134 94 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 HPCAP84074 193 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 PDK3Q15120 406 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 DNAJC14Q6Y2X3 702 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-204ENST00000395793 LRRC74BQ6ZQY2 392 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF621Q6ZSS3 439 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 CCDC103Q8IW40 242 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF100Q8IYN0 542 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF433Q8N7K0 673 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-204ENST00000395793 FBXW5Q969U6 566 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 OSGIN1Q9UJX0 560 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 MAGED1Q9Y5V3 778 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-204ENST00000395793 SPIN1Q9Y657 262 aaPredicted RBP15.92■□□□□ 0.14
CXCL12-204ENST00000395793 PLCE1Q9P212 2302 aa15.92■□□□□ 0.14
CXCL12-204ENST00000395793 TMEM72A0PK05 275 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 TMCC2O75069 709 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 PGM3O95394 542 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 IMPDH2P12268 514 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 RPS4XP62701 263 aaKnown RBP15.91■□□□□ 0.14
CXCL12-204ENST00000395793 PPA1Q15181 289 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 PGGHGQ32M88 737 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 ZNF672Q499Z4 452 aaPredicted RBP15.91■□□□□ 0.14
CXCL12-204ENST00000395793 SLC9B1Q4ZJI4 515 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 MRPL2Q5T653 305 aaKnown RBP15.91■□□□□ 0.14
CXCL12-204ENST00000395793 WDR60Q8WVS4 1066 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 MAELQ96JY0 434 aaKnown RBP15.91■□□□□ 0.14
CXCL12-204ENST00000395793 TRIM2Q9C040 744 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 NGBQ9NPG2 151 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 THAP1Q9NVV9 213 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 LIPT1Q9Y234 373 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 HDGFL3Q9Y3E1 203 aa15.91■□□□□ 0.14
CXCL12-204ENST00000395793 TMED7-TICAM2A0A0A6YYA0 188 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 ZC3H12DA2A288 527 aaKnown RBP15.9■□□□□ 0.14
CXCL12-204ENST00000395793 FAM171A2A8MVW0 826 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 SHISA9B4DS77 424 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 CDKN1AP38936 164 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 SLC16A1P53985 500 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 OR2B6P58173 313 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 H3F3AP84243 136 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 GTDC1Q4AE62 458 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 CROCCP2Q86T23 111 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 CMIPQ8IY22 773 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 TRIML2Q8N7C3 387 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 SMAP2Q8WU79 429 aaPredicted RBP15.9■□□□□ 0.14
CXCL12-204ENST00000395793 USB1Q9BQ65 265 aaKnown RBP15.9■□□□□ 0.14
CXCL12-204ENST00000395793 EMC3Q9P0I2 261 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 NOSIPQ9Y314 301 aaKnown RBP15.9■□□□□ 0.14
CXCL12-204ENST00000395793 TMED7Q9Y3B3 224 aa15.9■□□□□ 0.14
CXCL12-204ENST00000395793 HIVEP2P31629 2446 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 OR5H1A6NKK0 313 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 TRPC5OSA6NMA1 111 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 DNPH1O43598 174 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 RAD51DO75771 328 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 THBS1P07996 1170 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 GGT1P19440 569 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 TACR3P29371 465 aa15.89■□□□□ 0.13
CXCL12-204ENST00000395793 CLK1P49759 484 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms