RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SMAD7O15105 426 aaKnown RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC22A3O75751 556 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 AGR2O95994 175 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 GKN3PP0CG01 181 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ZCCHC18P0CG32 403 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 IDO1P14902 403 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 PGCP20142 388 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 CCNA2P20248 432 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 IGHV1-2P23083 117 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC7A1P30825 629 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 IDH2P48735 452 aaKnown RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 IDH3AP50213 366 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 H3F3AP84243 136 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 RASGEF1BQ0VAM2 473 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 EPS8Q12929 822 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 RNPS1Q15287 305 aaKnown RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 GPAT3Q53EU6 434 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 BEX5Q5H9J7 111 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 TMEM201Q5SNT2 666 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 MRPL2Q5T653 305 aaKnown RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ATAD3BQ5T9A4 648 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 AGBL2Q5U5Z8 902 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ATG16L1Q676U5 607 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 NXNQ6DKJ4 435 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 C3orf33Q6P1S2 294 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC2A7Q6PXP3 512 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 PRSS57Q6UWY2 283 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF704Q6ZNC4 412 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 BEND4Q6ZU67 534 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 MTDHQ86UE4 582 aaKnown RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC43A2Q8N370 569 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ZIC4Q8N9L1 334 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 VPS37AQ8NEZ2 397 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 PIWIL2Q8TC59 973 aaKnown RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC38A5Q8WUX1 472 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 OIT3Q8WWZ8 545 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 COX4I2Q96KJ9 171 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 MDFIQ99750 246 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ADAM19Q9H013 955 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 MTHFD2LQ9H903 347 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 TPT1P8Q9HAU6 139 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 TIGARQ9NQ88 270 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC25A37Q9NYZ2 338 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 NPAP1Q9NZP6 1156 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ZIM2Q9NZV7 527 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 CHRNA9Q9UGM1 479 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 SLC35A3Q9Y2D2 325 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 USH1CQ9Y6N9 552 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 TRBV5-3A0A0A0MS03 114 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 TMED7-TICAM2A0A0A6YYA0 188 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 TRIM64A6NGJ6 449 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 TRIM64BA6NI03 449 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 GJE1A6NN92 205 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 KIAA1324LA8MWY0 1029 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 PDLIM1O00151 329 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 SULT2B1O00204 365 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 FAAHO00519 579 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 RFXANKO14593 260 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 UBDO15205 165 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 LYZL6O75951 148 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 IGHV3-9P01782 118 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 THBS1P07996 1170 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 SOD3P08294 240 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 PABPC4LP0CB38 370 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 PPP3CBP16298 524 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 COX5AP20674 150 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 TACR3P29371 465 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 APOBEC1P41238 236 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 MRPL19P49406 292 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 P2RY4P51582 365 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 POLR2JP52435 117 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 PAGE3Q5JUK9 113 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 NCMAPQ5T1S8 102 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 GTF2IRD2BQ6EKJ0 949 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 ALKBH2Q6NS38 261 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF836Q6ZNA1 936 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 Q6ZT83 130 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 CXXC5Q7LFL8 322 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 GRINAQ7Z429 371 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 YTHDF3Q7Z739 585 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 GTF2IRD2Q86UP8 949 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 PRIMA1Q86XR5 153 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 KIRREL3Q8IZU9 778 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 ARFGAP2Q8N6H7 521 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 GLB1L3Q8NCI6 653 aaPredicted RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 MAL2Q969L2 176 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 Q96MF0 132 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 C7orf26Q96N11 449 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 CCL19Q99731 98 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 WFDC6Q9BQY6 131 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 OR10A4Q9H209 315 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 IKZF5Q9H5V7 419 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 NKIRAS1Q9NYS0 192 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 LIPT1Q9Y234 373 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 TMED7Q9Y3B3 224 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 PCDHB14Q9Y5E9 798 aa7.82□□□□□ -1.16
ATG4A-205ENST00000394892 FN1P02751 2386 aaKnown RBP7.82□□□□□ -1.16
ATG4A-205ENST00000394892 FAM234BA2RU67 622 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 CDHR4A6H8M9 788 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms