RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 A0A0A6YYC8 382 aaPredicted RBP11.32□□□□□ -0.6
RFC5-201ENST00000392542 NPIPB9F8W1W9 429 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 I3L1I5 382 aaPredicted RBP11.32□□□□□ -0.6
RFC5-201ENST00000392542 HRKO00198 91 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 NDUFB2O95178 105 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
RFC5-201ENST00000392542 NPR2P20594 1047 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 STX4Q12846 297 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 PRTGQ2VWP7 1150 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 ACSM3Q53FZ2 586 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 NPSR1Q6W5P4 371 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 MS4A15Q8N5U1 240 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 SAMD12Q8N8I0 201 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 FAM98AQ8NCA5 519 aaKnown RBP11.32□□□□□ -0.6
RFC5-201ENST00000392542 SDR9C7Q8NEX9 313 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 HDHD2Q9H0R4 259 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 KLHL21Q9UJP4 597 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 DTX4Q9Y2E6 619 aa11.32□□□□□ -0.6
RFC5-201ENST00000392542 SPTY2D1-AS1A0A0U1RR47 76 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 ORC5O43913 435 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 TFP02787 698 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 CTSEP14091 401 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 PYCR1P32322 319 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 CCR5P51681 352 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 GPR143P51810 404 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 ATP12AP54707 1039 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 PSMD4P55036 377 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 IGLV3-21P80748 117 aaPredicted RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 SRSF5Q13243 272 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 C1orf61Q13536 156 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 FZD2Q14332 565 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 KIAA0895LQ68EN5 471 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 PAMR1Q6UXH9 720 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 RFLNBQ8N5W9 214 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 AVL9Q8NBF6 648 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 RCBTB1Q8NDN9 531 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 OR4K13Q8NH42 304 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 TRMT10AQ8TBZ6 339 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 GHSRQ92847 366 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 RFT1Q96AA3 541 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 ZMYND19Q96E35 227 aaPredicted RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 SGTBQ96EQ0 304 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 RBM18Q96H35 190 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 MKKSQ9NPJ1 570 aaPredicted RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 PAQR5Q9NXK6 330 aaPredicted RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 CD207Q9UJ71 328 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 ICAM5Q9UMF0 924 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 XIRP2A4UGR9 3374 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 CTNSO60931 367 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 THEGLP0DJG4 465 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 RAB30Q15771 203 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 TP53I3Q53FA7 332 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 TIGD3Q6B0B8 471 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 ZNF595Q8IYB9 648 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 ARL14Q8N4G2 192 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 SPACA7Q96KW9 195 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 CNN2Q99439 309 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 TMEM246Q9BRR3 403 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.31□□□□□ -0.6
RFC5-201ENST00000392542 Q9N2J8 555 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 PRTFDC1Q9NRG1 225 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 MRPS33Q9Y291 106 aaKnown RBP11.31□□□□□ -0.6
RFC5-201ENST00000392542 IER3IP1Q9Y5U9 82 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 TMEM131Q92545 1883 aa11.31□□□□□ -0.6
RFC5-201ENST00000392542 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.3□□□□□ -0.6
RFC5-201ENST00000392542 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.3□□□□□ -0.6
RFC5-201ENST00000392542 A0A1W2PRG6 482 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 BLACEA4D250 179 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 SLC9B1P1A6NJY1 282 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 GNB5O14775 395 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 OGG1O15527 345 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 FOXS1O43638 330 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 PRAMEF2O60811 474 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 SERPINA3P01011 423 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 OR2T7P0C7T2 308 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 RAB3BP20337 219 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 PITPNBP48739 271 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 ACTA2P62736 377 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 SKP1P63208 163 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 RACK1P63244 317 aaKnown RBP11.3□□□□□ -0.6
RFC5-201ENST00000392542 ACTG2P63267 376 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 GGTLC2Q14390 218 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 GPR176Q14439 515 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 ZNF267Q14586 743 aaPredicted RBP11.3□□□□□ -0.6
RFC5-201ENST00000392542 SLC25A35Q3KQZ1 300 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 SYS1Q8N2H4 156 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 YIPF7Q8N8F6 280 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 POMGNT2Q8NAT1 580 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 OR13C5Q8NGS8 318 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 OR2T27Q8NH04 317 aa11.3□□□□□ -0.6
RFC5-201ENST00000392542 CREB3L1Q96BA8 519 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms