RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 FBXW9Q5XUX1 488 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 GLDNQ6ZMI3 551 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 C5orf24Q7Z6I8 188 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 PTOV1Q86YD1 416 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 GTPBP8Q8N3Z3 284 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 SMAP2Q8WU79 429 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 WDR13Q9H1Z4 485 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 CXCL16Q9H2A7 254 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 SEC61A2Q9H9S3 476 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D17Q9HA65 648 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 MAN2C1Q9NTJ4 1040 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 WDR81Q562E7 1941 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 CCDC187A0A096LP49 1063 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 SHISA3A0PJX4 238 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 OR5H15A6NDH6 313 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 OR5H1A6NKK0 313 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 K7ERQ8 282 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 SYT5O00445 386 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 NFATC1O95644 943 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 NR2F6P10588 404 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 DAOP14920 347 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 PRDX3P30048 256 aaKnown RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 TAGLN2P37802 199 aaKnown RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 RPS10P46783 165 aaKnown RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 CCR4P51679 360 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 HSD11B2P80365 405 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 HGFACQ04756 655 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 TIGD5Q53EQ6 642 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 AKR1C8PQ5T2L2 129 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 HIST2H3PS2Q5TEC6 136 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 OR2G6Q5TZ20 316 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 C6orf120Q7Z4R8 191 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 OR4A4PQ8NGN8 299 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 FDXACB1Q9BRP7 624 aaPredicted RBP8.7□□□□□ -1.02
PTPRA-204ENST00000380393 CALML5Q9NZT1 146 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 USP3Q9Y6I4 520 aa8.7□□□□□ -1.02
PTPRA-204ENST00000380393 SRPRAP08240 638 aaKnown RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 UCHL1P09936 223 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SFTA3P0C7M3 94 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ETFAP13804 333 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TLX1P31314 330 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 IL2RGP31785 369 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 WNT5AP41221 380 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 GSK3AP49840 483 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SP3Q02447 781 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SF1Q15637 639 aaKnown RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 XKR7Q5GH72 579 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 NKAIN2Q5VXU1 208 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF546Q86UE3 836 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 PARGQ86W56 976 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 LGI4Q8N135 537 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ACBD4Q8NC06 268 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR7G2Q8NG99 324 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR5R1Q8NH85 324 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TNFRSF14Q92956 283 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TMED9Q9BVK6 235 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SLC26A1Q9H2B4 701 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.69□□□□□ -1.023e-6■■□□□ 13.8
PTPRA-204ENST00000380393 CBLN4Q9NTU7 201 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TDP1Q9NUW8 608 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 PCDHB1Q9Y5F3 818 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 PLXNB2O15031 1838 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 UBE2QL1A1L167 161 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SERPINA5P05154 406 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 F13BP05160 661 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 LAMP1P11279 417 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 CHI3L1P36222 383 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 DHPSP49366 369 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ART1P52961 327 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 H2BFSP57053 126 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SLC25A52Q3SY17 297 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 BEX5Q5H9J7 111 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SPANXN4Q5MJ08 99 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ULK3Q6PHR2 472 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 MAML2Q8IZL2 1156 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR6V1Q8N148 313 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 LCN9Q8WX39 176 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 FAM50BQ9Y247 325 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 AAR2Q9Y312 384 aaKnown RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SMCO3A2RU48 225 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 E7EQ34 232 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF587BE7ETH6 402 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 GOSR2O14653 212 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 B4GALT3O60512 393 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 BCHEP06276 602 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 FGF9P31371 208 aaPredicted RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR3A1P47881 315 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 CDKN2DP55273 166 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 GFI1BQ5VTD9 330 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 UNC93AQ86WB7 457 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 CPXM2Q8N436 756 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR5T1Q8NG75 326 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR52B4Q8NGK2 314 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 OR4C6Q8NH72 309 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 MALSU1Q96EH3 234 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 DIRC2Q96SL1 478 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TSSK6Q9BXA6 273 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 FN3KRPQ9HA64 309 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms