RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PTGES3Q15185 160 aaKnown RBP11.01□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF628Q5EBL2 1059 aa11.01□□□□□ -0.65
NPHP4-202ENST00000378161 RHOFQ9HBH0 211 aa11.01□□□□□ -0.65
NPHP4-202ENST00000378161 KCMF1Q9P0J7 381 aa11.01□□□□□ -0.65
NPHP4-202ENST00000378161 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
NPHP4-202ENST00000378161 NINQ8N4C6 2090 aa11.01□□□□□ -0.65
NPHP4-202ENST00000378161 OPN1LWP04000 364 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ADAM8P78325 824 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 SRSF11Q05519 484 aaKnown RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 RBBP4Q09028 425 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 FBXL22Q6P050 247 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 TP53INP2Q8IXH6 220 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 FRMD1Q8N878 549 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OR5D16Q8NGK9 328 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OR2L2Q8NH16 312 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 LINC01599Q8WXQ3 324 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 AP1S3Q96PC3 154 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 RASL12Q9NYN1 266 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 CLEC2DQ9UHP7 191 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 GOLGA4Q13439 2230 aaKnown RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 RNASEK-C17orf49H0YIS7 233 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 NME6O75414 186 aaPredicted RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 MSX1P28360 303 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 CD34P28906 385 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 GRK4P32298 578 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 IGFALSP35858 605 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 STARD6P59095 220 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 C9orf64Q5T6V5 341 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 HBMQ6B0K9 141 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF534Q76KX8 674 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 SERPINA9Q86WD7 417 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 NPWQ8N729 165 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OR52N2Q8NGI0 321 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 FAM216AQ8WUB2 273 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 EDARADDQ8WWZ3 215 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 TRIM36Q9NQ86 728 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM184BQ9Y519 407 aaPredicted RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 RDH16O75452 317 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OPN1SWP03999 348 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 DTYMKP23919 212 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 IRS1P35568 1242 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 SPICQ8N5J4 248 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 SUMF2Q8NBJ7 301 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 MFSD9Q8NBP5 474 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 SMPDL3AQ92484 453 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 PHYHIPLQ96FC7 376 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 NECAB3Q96P71 396 aaPredicted RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 CDK15Q96Q40 435 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 NEU1Q99519 415 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 MRI1Q9BV20 369 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OR14J1Q9UGF5 321 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 FLVCR2Q9UPI3 526 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 WIF1Q9Y5W5 379 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 IGF2P01344 180 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ASGR1P07306 291 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 RAD52P43351 418 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 PLA1AQ53H76 456 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ARRDC1Q8N5I2 433 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 OLIG1Q8TAK6 271 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 HIST1H2BAQ96A08 127 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ADIPOR1Q96A54 375 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 NUDT11Q96G61 164 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 MRGPRX4Q96LA9 322 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF382Q96SR6 550 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF2Q9BSG1 426 aaPredicted RBP11□□□□□ -0.65
NPHP4-202ENST00000378161 NELFAQ9H3P2 528 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 MMP26Q9NRE1 261 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 KCTD3Q9Y597 815 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 PCDHB11Q9Y5F2 797 aa11□□□□□ -0.65
NPHP4-202ENST00000378161 GLTPD2A6NH11 291 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SNRPGP15A8MWD9 76 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SYT5O00445 386 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ITGB1BP1O14713 200 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 NSA2O95478 260 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 NFATC1O95644 943 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 PTBP3O95758 552 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 NFATC4Q14934 902 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF311Q5JNZ3 666 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM201Q5SNT2 666 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM69Q5SWH9 247 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 TRNP1Q6NT89 227 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 KCTD9Q7L273 389 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 CEACAM19Q7Z692 300 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SLC44A3Q8N4M1 653 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 FAM160A2Q8N612 972 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 FAM71CQ8NEG0 241 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 DCUN1D4Q92564 292 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 RGMAQ96B86 450 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 IMP4Q96G21 291 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 NSUN5Q96P11 429 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 MTERF1Q99551 399 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 FNDC11Q9BVV2 318 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 WWTR1Q9GZV5 400 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 PDE7BQ9NP56 450 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 MYOZ1Q9NP98 299 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 CACNG4Q9UBN1 327 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms