RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CCDC124Q96CT7 223 aaKnown RBP13.51□□□□□ -0.25
HSPG2-201ENST00000374673 TUBA1CQ9BQE3 449 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 PAQR5Q9NXK6 330 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ALKBH4Q9NXW9 302 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 SH3BGRL2Q9UJC5 107 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 FAM215AQ9Y5M1 114 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 MPDZO75970 2070 aa13.51□□□□□ -0.25
HSPG2-201ENST00000374673 A0A0J9YW62 118 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 CPSF4LA6NMK7 179 aaKnown RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 E9PLN8 166 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 H0YC42 278 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 EIF1AYO14602 144 aaKnown RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 ACOT8O14734 319 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 CXCR1P25024 350 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 SFTPDP35247 375 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 CLK1P49759 484 aaKnown RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 TPD52P55327 224 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 TMEM176BQ3YBM2 270 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 ACSF3Q4G176 576 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 ALG10BQ5I7T1 473 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 PDSS1Q5T2R2 415 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 SWT1Q5T5J6 900 aaKnown RBP13.5□□□□□ -0.25
HSPG2-201ENST00000374673 DEF8Q6ZN54 512 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 ASRGL1Q7L266 308 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 OR2V1Q8NHB1 315 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 ADAMTS16Q8TE57 1224 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 DDIT4LQ96D03 193 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 PYURFQ96I23 114 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 UCN2Q96RP3 112 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 DMRTA2Q96SC8 542 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 VKORC1Q9BQB6 163 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 AMBRA1Q9C0C7 1298 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 COQ10BQ9H8M1 238 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 MEMO1Q9Y316 297 aa13.5□□□□□ -0.25
HSPG2-201ENST00000374673 TCRBV5S2A0A599 114 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 TRAPPC13A5PLN9 417 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CD8B2A6NJW9 211 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 ELOA3DA6NLF2 546 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CLCA1A8K7I4 914 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CCL21O00585 134 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 TNFSF11O14788 317 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CHP2O43745 196 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 SEMA7AO75326 666 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 PRKD3O94806 890 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 STAMBPO95630 424 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 OPN1LWP04000 364 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 SEMG1P04279 462 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 IFNW1P05000 195 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 PNMTP11086 282 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 SLC7A1P30825 629 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CDH12P55289 794 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 ELOA3BQ3SY89 546 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 NSUN5P2Q63ZY6 315 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CYP2R1Q6VVX0 501 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 B3GNT6Q6ZMB0 384 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 C3P1Q6ZMU1 363 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CHMP1BQ7LBR1 199 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 TSPYL5Q86VY4 417 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-201ENST00000374673 FAM86B1Q8N7N1 296 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 ATP6V1C2Q8NEY4 427 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 ELOA3Q8NG57 546 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 OR10D3Q8NH80 312 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 POP5Q969H6 163 aaKnown RBP13.49□□□□□ -0.25
HSPG2-201ENST00000374673 PRRC1Q96M27 445 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CALHM2Q9HA72 323 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 SELENONQ9NZV5 590 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 CLCF1Q9UBD9 225 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 HDGFL3Q9Y3E1 203 aa13.49□□□□□ -0.25
HSPG2-201ENST00000374673 NBASA2RRP1 2371 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 A0A087WUJ7 227 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 A0A1W2PNR3 127 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 A8MVM7 634 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 LRRTM2O43300 516 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 NPIPB7O75200 414 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 OR5F1O95221 314 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 LYPD3O95274 346 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 THY1P04216 161 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 CCNA2P20248 432 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 EIF1AXP47813 144 aaKnown RBP13.48□□□□□ -0.25
HSPG2-201ENST00000374673 TAS2R41P59536 307 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 HBMQ6B0K9 141 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 TMEM211Q6ICI0 200 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 C5orf46Q6UWT4 87 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 RPTNQ6XPR3 784 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 LINC00114Q6XXX2 140 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 TMPPEQ6ZT21 453 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 YTHDF3Q7Z739 585 aaKnown RBP13.48□□□□□ -0.25
HSPG2-201ENST00000374673 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 RPRMLQ8N4K4 120 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 STK35Q8TDR2 534 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF845Q96IR2 970 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-201ENST00000374673 ARL5BQ96KC2 179 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 LRGUKQ96M69 825 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 OR5B2Q96R09 309 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 TRIB1Q96RU8 372 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 TTYH2Q9BSA4 534 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 POTEKPQ9BYX7 375 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms