RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MKS1Q9NXB0 559 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 TAS2R16Q9NYV7 291 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MALT1Q9UDY8 824 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 NOSIPQ9Y314 301 aaKnown RBP12.12□□□□□ -0.47
CXCL12-202ENST00000374426 MALRD1Q5VYJ5 2156 aa12.12□□□□□ -0.47
CXCL12-202ENST00000374426 DUXAA6NLW8 204 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 M0R1B8 84 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
CXCL12-202ENST00000374426 AK1P00568 194 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
CXCL12-202ENST00000374426 ITGA5P08648 1049 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 TFPIP10646 304 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 G6PDP11413 515 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 SLC25A16P16260 332 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 PGM1P36871 562 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
CXCL12-202ENST00000374426 FABP6P51161 128 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 SLC16A1P53985 500 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 CASP9P55211 416 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 GABRA6Q16445 453 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 ARHGAP11BQ3KRB8 267 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 FAM168AQ92567 244 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 APOPT1Q96IL0 206 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 KCNK17Q96T54 332 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 INPP5KQ9BT40 448 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 C1QTNF6Q9BXI9 259 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 OR11A1Q9GZK7 315 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 SLC17A7Q9P2U7 560 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 CHRNA9Q9UGM1 479 aa12.11□□□□□ -0.47
CXCL12-202ENST00000374426 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
CXCL12-202ENST00000374426 RNF103-CHMP3A0A140T963 221 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 PDLIM1O00151 329 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 GPR171O14626 319 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 KIAA0513O60268 411 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 PMS2P2O95744 297 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 PLAURQ03405 335 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 PGS1Q32NB8 556 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 KRTAP24-1Q3LI83 254 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 OR7E24Q6IFN5 339 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF544Q6NX49 715 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 C16orf62Q7Z3J2 963 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 LSRQ86X29 649 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-202ENST00000374426 CCDC103Q8IW40 242 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 WDR31Q8NA23 367 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 OR52E4Q8NGH9 312 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 PIGXQ8TBF5 258 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 MIPOL1Q8TD10 442 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 SLC35G5Q96KT7 338 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 BEX2Q9BXY8 128 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 AMBRA1Q9C0C7 1298 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 OR51I1Q9H343 314 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 ZDHHC2Q9UIJ5 367 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 HDGFL3Q9Y3E1 203 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-202ENST00000374426 ARFGEF3Q5TH69 2177 aa12.1□□□□□ -0.47
CXCL12-202ENST00000374426 ANKRD28O15084 1053 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 DNPH1O43598 174 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 MRPL33O75394 65 aaKnown RBP12.09□□□□□ -0.47
CXCL12-202ENST00000374426 LY6HO94772 140 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF16P17020 682 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-202ENST00000374426 RYKP34925 604 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 EFNA4P52798 201 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 CLDN8P56748 225 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 H3F3AP84243 136 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 SLC25A3Q00325 362 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 FUT5Q11128 374 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 OR4F3Q6IEY1 312 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 TYW3Q6IPR3 259 aaKnown RBP12.09□□□□□ -0.47
CXCL12-202ENST00000374426 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 GRINAQ7Z429 371 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 ADGRG3Q86Y34 549 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 DEPDC4Q8N2C3 294 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 ARIH2OSQ8N7S6 290 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 EIF1ADQ8N9N8 165 aaKnown RBP12.09□□□□□ -0.47
CXCL12-202ENST00000374426 KIF18AQ8NI77 898 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 TUBGCP3Q96CW5 907 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 ZG16BQ96DA0 208 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 EXD2Q9NVH0 621 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
CXCL12-202ENST00000374426 CLDN24A6NM45 220 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 RNASET2O00584 256 aaKnown RBP12.08□□□□□ -0.48
CXCL12-202ENST00000374426 GUSBP08236 651 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 OR12D1P0DN82 309 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
CXCL12-202ENST00000374426 SERPINB5P36952 375 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
CXCL12-202ENST00000374426 EMX2Q04743 252 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 C9orf135Q5VTT2 229 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 CYB5R2Q6BCY4 276 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 TNFAIP8L2Q6P589 184 aaPredicted RBP12.08□□□□□ -0.48
CXCL12-202ENST00000374426 CASP12Q6UXS9 341 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 FRRS1Q6ZNA5 592 aa12.08□□□□□ -0.48
CXCL12-202ENST00000374426 HMGN2P46Q86SG4 172 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms