RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ARFGAP1Q8N6T3 406 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ADAMTS18Q8TE60 1221 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 LIPHQ8WWY8 451 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF75AQ96N20 296 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 INSM2Q96T92 566 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 TWSG1Q9GZX9 223 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ZCWPW2A0A1B0GU75 182 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 LCMT2O60294 686 aaKnown RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 POU3F2P20265 443 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 CLDN6P56747 220 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 HOXC5Q00444 222 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 RTN4RL1Q86UN2 441 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 LRRC18Q8N456 261 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 GPR148Q8TDV2 347 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 PIGCQ92535 297 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 C4orf36Q96KX1 117 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 DMRT3Q9NQL9 472 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 COPS3Q9UNS2 423 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 KIR2DS5A0A0G2JLQ3 304 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 A0A0G2JNG1 304 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 KIR2DS3K7RE56 304 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 FUT1P19526 365 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 MRPS34P82930 218 aaKnown RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 KIR2DS5Q14953 304 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 DCAF12Q5T6F0 453 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF836Q6ZNA1 936 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 CDS1Q92903 461 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 TRAV27A0A087WT01 109 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 FUOMA2VDF0 154 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 LINC01565O15544 149 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 SCAF4O95104 1147 aaKnown RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 IGFBP1P08833 259 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 CCL11P51671 97 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ALKAL1Q6UXT8 129 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF705AQ6ZN79 300 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF704Q6ZNC4 412 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 TSPYL5Q86VY4 417 aaPredicted RBP13.39□□□□□ -0.27
TRAF1-201ENST00000373887 NICN1Q9BSH3 213 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 FOXQ1Q9C009 403 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 SDHAF2Q9NX18 166 aa13.39□□□□□ -0.27
TRAF1-201ENST00000373887 D6RAR5 112 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 H7C1Q1 480 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 C7P10643 843 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CBR1P16152 277 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 GIFP27352 417 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 HOXA9P31269 272 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 TSSK4Q6SA08 328 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 RDH10Q8IZV5 341 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PAPD5Q8NDF8 572 aaKnown RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 DMBX1Q8NFW5 382 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 OR7G3Q8NG95 312 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 OR1J4Q8NGS1 313 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PPP1R35Q8TAP8 253 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 RAB9BQ9NP90 201 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 LHX3Q9UBR4 397 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CNOT11Q9UKZ1 510 aaKnown RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 HSPE1-MOB4S4R3N1 261 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 SURF4O15260 269 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 DDCP20711 480 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PTAFRP25105 342 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CNN3Q15417 329 aaKnown RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 LINC00696Q6ZRV3 163 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 ACOT4Q8N9L9 421 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 ABHD11Q8NFV4 315 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 OR7G1Q8NGA0 311 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 MITD1Q8WV92 249 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 HOXD1Q9GZZ0 328 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 HIPK2Q9H2X6 1198 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CUTCQ9NTM9 273 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 SLC23A2Q9UGH3 650 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 RPE65Q16518 533 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 BRICD5Q6PL45 260 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 DRAXINQ8NBI3 349 aaPredicted RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 ISG20Q96AZ6 181 aaKnown RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 FOXRED1Q96CU9 486 aaPredicted RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 SLC6A16Q9GZN6 736 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 SIDT1Q9NXL6 827 aaKnown RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 EHFQ9NZC4 300 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PCDHGA7Q9Y5G6 932 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 TAF1P21675 1872 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PLSCR5A0PG75 271 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 SULT2B1O00204 365 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 SRPX2O60687 465 aaPredicted RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 OMGP23515 440 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PTGER4P35408 488 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CXCR4P61073 352 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 TCEAL1Q15170 157 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 ESCO2Q56NI9 601 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CCNJQ5T5M9 372 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 PAQR9Q6ZVX9 377 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 FJX1Q86VR8 437 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 MS4A4EQ96PG1 132 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 ADOQ96SZ5 270 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 CNTNAP3Q9BZ76 1288 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 UBE2ZQ9H832 354 aaPredicted RBP13.38□□□□□ -0.27
TRAF1-201ENST00000373887 NOX3Q9HBY0 568 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms