RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CYP4Z2PQ8N1L4 340 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 AQP11Q8NBQ7 271 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 APCDD1LQ8NCL9 501 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 OR10Q1Q8NGQ4 319 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 BBS10Q8TAM1 723 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SFXN5Q8TD22 340 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 AP3S1Q92572 193 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 DGAT2Q96PD7 388 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SIGLEC12Q96PQ1 595 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 BTBD2Q9BX70 525 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ALOXE3Q9BYJ1 711 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 C6orf62Q9GZU0 229 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 OR51B5Q9H339 312 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ANKRD19PQ9H560 264 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 BCL2L10Q9HD36 194 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 KLHL1Q9NR64 748 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 MRPS18AQ9NVS2 196 aaKnown RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ANKRD10Q9NXR5 420 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 KCMF1Q9P0J7 381 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 GSTK1Q9Y2Q3 226 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 YARS2Q9Y2Z4 477 aaKnown RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 DSPPQ9NZW4 1301 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ZGRF1Q86YA3 2104 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SLC35F4A4IF30 521 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 TMEM229AB2RXF0 380 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 KLRC4-KLRK1H3BQV0 150 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 BOLA2-SMG1P6H3BVE0 249 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SAP18O00422 153 aaKnown RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 PLPP1O14494 284 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 NME2P1O60361 137 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ATP6V1G1O75348 118 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SH3BGRLO75368 114 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ITGA10O75578 1167 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 NEURL1O76050 574 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SOX30O94993 753 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 MFN2O95140 757 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ETHE1O95571 254 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 LGI1O95970 557 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 IL1AP01583 271 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 KRT8P05787 483 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 NUDT7P0C024 238 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 TRAPPC2P0DI81 140 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 TRAPPC2BP0DI82 140 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 NR2F6P10588 404 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 NME2P22392 152 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 CAPZA2P47755 286 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SSR4P51571 173 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SMSP52788 366 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 MLLT11Q13015 90 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 GAB1Q13480 694 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 TP53BP2Q13625 1128 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SPHARQ15513 63 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 MED22Q15528 200 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SPDYE7PQ495Y7 208 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 C12orf73Q69YU5 71 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SPINK14Q6IE38 97 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 MTFR2Q6P444 385 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 METAP1DQ6UB28 335 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 C6orf120Q7Z4R8 191 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 UBE3DQ7Z6J8 389 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 CADM3Q8N126 398 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 CLDN22Q8N7P3 220 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 TMEM52Q8NDY8 209 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 OR5L2Q8NGL0 311 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 OR8K3Q8NH51 312 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 THAP3Q8WTV1 239 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 OTUB1Q96FW1 271 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 RBM18Q96H35 190 aaKnown RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 WDFY2Q96P53 400 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 SLC30A2Q9BRI3 323 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 CDADC1Q9BWV3 514 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 POLDIP3Q9BY77 421 aaKnown RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 POLR2J3Q9H1A7 115 aaKnown RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 NMNAT1Q9HAN9 279 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 CACYBPQ9HB71 228 aaKnown RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 KRCC1Q9NPI7 259 aaPredicted RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ABCB10Q9NRK6 738 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 GPATCH2Q9NW75 528 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ACAD8Q9UKU7 415 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 EXO1Q9UQ84 846 aaKnown RBP9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ERVK-11Q9UQG0 969 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 ENTPD4Q9Y227 616 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 LIPT1Q9Y234 373 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 CLDN16Q9Y5I7 305 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 PMF1-BGLAPU3KQ54 211 aa9.51□□□□□ -0.89
COL5A1-202ENST00000371820 A0A1W2PRQ8 180 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 DUXAA6NLW8 204 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 C17orf105B2RV13 164 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 TGFBR3LH3BV60 316 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 SYT5O00445 386 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 OR10H3O60404 316 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 MAN1A2O60476 641 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 ZG16O60844 167 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 LDB3O75112 727 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 GASTP01350 101 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 IL3P08700 152 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 ZNF24P17028 368 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 CFL1P23528 166 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 AQP1P29972 269 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 C21orf33P30042 268 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms