RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MYEOVQ96EZ4 313 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC25A18Q9H1K4 315 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 DUSP21Q9H596 190 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 DUSP22Q9NRW4 184 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 PLCXD1Q9NUJ7 323 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 PCDHGA6Q9Y5G7 932 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 HS3ST3A1Q9Y663 406 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 METTL15A6NJ78 407 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 EFCAB7A8K855 629 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 M0R036 132 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 CTNSO60931 367 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 TP53P04637 393 aaPredicted RBP11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 GPR50Q13585 617 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 OR7A5Q15622 319 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 LTB4RQ15722 352 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 LRRC69Q6ZNQ3 347 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 SYNPRQ8TBG9 265 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 SNAPC3Q92966 411 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 OR5M11Q96RB7 305 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 PHB2Q99623 299 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 VRK1Q99986 396 aaPredicted RBP11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 GABARAPL1Q9H0R8 117 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 FN3KQ9H479 309 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 APMAPQ9HDC9 416 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 A0A1B0GWA3 101 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 TFP02787 698 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 AKR1C4P17516 323 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 RAB3AP20336 220 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 DLX5P56178 289 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 ABHD17BQ5VST6 288 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 ELMOD2Q8IZ81 293 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC16A11Q8NCK7 471 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 KATNB1Q9BVA0 655 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 SEMA6CQ9H3T2 930 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 LYRM4Q9HD34 91 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 FAM86C1Q9NVL1 165 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 PTTG3PQ9NZH4 202 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 CDK5RAP2Q96SN8 1893 aa11.03□□□□□ -0.64
DEPDC1-201ENST00000370966 RFPL3O75679 317 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 MPIG6BO95866 241 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 PCSK6P29122 969 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 CTHP32929 405 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 IDUAP35475 653 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 IRS1P35568 1242 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 MTNR1BP49286 362 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 TAS2R31P59538 309 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SIRPAP78324 504 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 TATDN3Q17R31 274 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 LHX8Q68G74 356 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 KIF18BQ86Y91 864 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 CMIPQ8IY22 773 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 GALNT11Q8NCW6 608 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 TNFRSF13CQ96RJ3 184 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC6A20Q9NP91 592 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 ACER3Q9NUN7 267 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC39A1Q9NY26 324 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SNX11Q9Y5W9 270 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 EEF1E1-BLOC1S5C9J1V9 151 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 AQP9O43315 295 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 CPNE6O95741 557 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 LGI1O95970 557 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 PIPP12273 146 aaPredicted RBP11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 ARSBP15848 533 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 MMP11P24347 488 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 OTX2P32243 289 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 LIPAP38571 399 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SNRPD2P62316 118 aaKnown RBP11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 MEF2DQ14814 521 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 UBE2UQ5VVX9 321 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SAXO2Q658L1 398 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 OPN5Q6U736 354 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 GDF7Q7Z4P5 450 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 NRARPQ7Z6K4 114 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 TECPR1Q7Z6L1 1165 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 MS4A6EQ96DS6 147 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SFXN2Q96NB2 322 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 OR2M2Q96R28 347 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 CDC6Q99741 560 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 ZNF160Q9HCG1 818 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 FGF22Q9HCT0 170 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 TM7SF3Q9NS93 570 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 CXXC1Q9P0U4 656 aaPredicted RBP11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 SLC6A14Q9UN76 642 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 MMACHCQ9Y4U1 282 aa11.02□□□□□ -0.64
DEPDC1-201ENST00000370966 TRDV1A0A1B0GX56 115 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 TCRBV5S2A0A599 114 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 PLATP00750 562 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 HRGP04196 525 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 ZNF16P17020 682 aaPredicted RBP11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC2A5P22732 501 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 PRPH2P23942 346 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 LSSP48449 732 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 CRMP1Q14194 572 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 ADPRMQ3LIE5 342 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 AGAP7PQ5VUJ5 663 aa11.02□□□□□ -0.65
DEPDC1-201ENST00000370966 ARSKQ6UWY0 536 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms