RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 EMBQ6PCB8 327 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 CXXC5Q7LFL8 322 aaKnown RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ANKRD46Q86W74 232 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ADGRG3Q86Y34 549 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 VPS37AQ8NEZ2 397 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ZNF563Q8TA94 476 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 NEURL3Q96EH8 262 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ARL5BQ96KC2 179 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 PKNOX2Q96KN3 472 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 PPP1R36Q96LQ0 422 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 ALG2Q9H553 416 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 BARX1Q9HBU1 254 aaPredicted RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 CHRNA9Q9UGM1 479 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 GDF2Q9UK05 429 aaPredicted RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 NOSIPQ9Y314 301 aaKnown RBP14.12□□□□□ -0.15
CKS1B-202ENST00000368436 RAP2CQ9Y3L5 183 aa14.12□□□□□ -0.15
CKS1B-202ENST00000368436 SONP18583 2426 aaKnown RBP14.11□□□□□ -0.15
CKS1B-202ENST00000368436 GPR171O14626 319 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 BIRC5O15392 142 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 ADAM11O75078 769 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 SNUPNO95149 360 aaKnown RBP14.11□□□□□ -0.15
CKS1B-202ENST00000368436 IGHV3-9P01782 118 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 TFPIP10646 304 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 KCNJ10P78508 379 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 H3F3AP84243 136 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 CHI3L2Q15782 390 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 LRRC34Q8IZ02 419 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 SPATA3Q8NHX4 192 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 PIGXQ8TBF5 258 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 APH1AQ96BI3 265 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 ZHX1-C8orf76Q96EF9 292 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 HS6ST2Q96MM7 605 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 MUS81Q96NY9 551 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.11□□□□□ -0.15
CKS1B-202ENST00000368436 HAO1Q9UJM8 370 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 MGAT4BQ9UQ53 548 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 TRAPPC4Q9Y296 219 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 B3GALT5Q9Y2C3 310 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 SLC25A15Q9Y619 301 aa14.11□□□□□ -0.15
CKS1B-202ENST00000368436 YLPM1P49750 1951 aaKnown RBP14.11□□□□□ -0.15
CKS1B-202ENST00000368436 PLCE1Q9P212 2302 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 WDR91A4D1P6 747 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 TLX2O43763 284 aaPredicted RBP14.1□□□□□ -0.15
CKS1B-202ENST00000368436 CD5LO43866 347 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 RAD51DO75771 328 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 C1QCP02747 245 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 PTAFRP25105 342 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 RYKP34925 604 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 KHKP50053 298 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 RPL14P50914 215 aaKnown RBP14.1□□□□□ -0.15
CKS1B-202ENST00000368436 CDH11P55287 796 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 CHRNEQ04844 493 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 NRF1Q16656 503 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 DPY19L1Q2PZI1 675 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 SPANXN4Q5MJ08 99 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 AGAP6Q5VW22 663 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 C11orf71Q6IPW1 123 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 TMEM108Q6UXF1 575 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 UBE2J2Q8N2K1 259 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 ARFGAP2Q8N6H7 521 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 TRIM44Q96DX7 344 aaPredicted RBP14.1□□□□□ -0.15
CKS1B-202ENST00000368436 SORT1Q99523 831 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 OR11A1Q9GZK7 315 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 SSU72Q9NP77 194 aaKnown RBP14.1□□□□□ -0.15
CKS1B-202ENST00000368436 ASB6Q9NWX5 421 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 MALT1Q9UDY8 824 aa14.1□□□□□ -0.15
CKS1B-202ENST00000368436 MARCOQ9UEW3 520 aaPredicted RBP14.1□□□□□ -0.15
CKS1B-202ENST00000368436 HEATR1Q9H583 2144 aaKnown RBP14.09□□□□□ -0.15
CKS1B-202ENST00000368436 CIB4A0PJX0 185 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 CLDN24A6NM45 220 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 E7EQL1 145 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 PDLIM1O00151 329 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 HMGN4O00479 90 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 MRPL33O75394 65 aaKnown RBP14.09□□□□□ -0.15
CKS1B-202ENST00000368436 TP53P04637 393 aaPredicted RBP14.09□□□□□ -0.15
CKS1B-202ENST00000368436 DHRS4L1P0CG22 281 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 TTKP33981 857 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 HTR3AP46098 478 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 IDH2P48735 452 aaKnown RBP14.09□□□□□ -0.15
CKS1B-202ENST00000368436 CLNS1AP54105 237 aaKnown RBP14.09□□□□□ -0.15
CKS1B-202ENST00000368436 GABRA6Q16445 453 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 GPAT3Q53EU6 434 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 HMGN2P46Q86SG4 172 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 HIPK1Q86Z02 1210 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 CCDC103Q8IW40 242 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 OR52N5Q8NH56 324 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 CNOT9Q92600 299 aaKnown RBP14.09□□□□□ -0.15
CKS1B-202ENST00000368436 CCDC115Q96NT0 180 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 DHRS9Q9BPW9 319 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 SLC35A5Q9BS91 424 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 TAS2R16Q9NYV7 291 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 TMEM181Q9P2C4 612 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 BTNL2Q9UIR0 455 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 COL6A5A8TX70 2615 aa14.09□□□□□ -0.15
CKS1B-202ENST00000368436 FBN1P35555 2871 aaKnown RBP14.08□□□□□ -0.16
CKS1B-202ENST00000368436 AGAP5A6NIR3 686 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 CCT8L1PA6NM43 557 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 AP3D1O14617 1153 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 ZNF208O43345 1280 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 SSX4O60224 188 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms